Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01728 ATGTACAACGCATATGTTAGCCCAACAGTATATGCTGTTAGGTGTAGAGAAACATTCTCATTATCTTTCAATGGCTACTCAAACTTCTGTCCCGAAAGATTTGATGGAACCCCCTCATACTGTTTGTCATGTTGTGGTTGTTGTGATTGTTGTTCAGCTTCCACTTACAGAGTACCTGTAAAGTCTTGTCTTGTAAATGGGTTGAGGCAATCTGCTCTTCTTCAATTGTCAGCAACTAGAAGGTTGATACTGGGTGGGGGAGATCATTACCTTTCCCGGCTGCCAGCTTATGGTTTCCTCAGAGATTGTCAGGAGCTTAACTCTTCTGTCAATGAGAAAACTATTTGCAATAGTAGTAGGCGGAGCATAAAGGGAAGATGTATTCGTGTTACCACACAAAAAGGGAGAAAATTTTCTCATTCATTTGGTCCTGATGATTTTGAAGCTGTTCTGAGCTTGTTGAATGAGGAGGCAGATAGGGAAGCTACCATTTGTAGCAAATGTAAGGATGTGTTTTCATCCAAAAGAATGGAAGCTGAGAAAGCAAGAAAAAGTGTTAGGAGAGAGGGACATTTGAATTCAGGTGAGAAAGTAAAATCAGAGAAAGCGGGAGATTTGAAGCAACATCAGTCATCCACCATAGAATTGAGAAGAGAATATGAAAAACCTAACAAAGAAAGGGAAGCCTTTGCAAACAATGAAAACCATAGGAAACGAAGAAATGTATCTAGTGGTTCATCTTATTATTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGCTCAGGATGAGATTGGTTTGGAAGAATTGTCACTGGAAATTGAGAAGGGCAAAGGAAATGGTGTGGAGGAACAAGTGAAGGAACAAGTTAAGGAAGAATTCAAGGGGCAAAGGGATGACTCAAAGAAGCTGTTGGGTGTTTCAAATAAGGAAAGATTTGCGTCTGGTGAGGATATTGATTGGAGCATAAGGAAGAAGACTGAAAAGAAGCTGACTCAGGGAACTCTGCAAAACACAGAATCCACAAAGGAACAACATGATATGTATTTGGGAGGATTTAAAACACATGAATCTGGTCATAAAAGATTGTCTGTTTCACAAAACCAAGTCAATAGTGAGGAAGATAAATCATCTTTTGTTGACTATTTGGATAAGAAAACAAACAAGTCATATCTTCAAACAGTCAATAGAAGAAAACATCAATCTATAGATATACAAGAGTCTGATTGTAATGAAGTTGAGAAAAGTTCGTTATCACAAAAGGTGTTGAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAATATCATTGAAGAAAACAACTGATGAACGTGAAAAGATTGTTGGTTCCACTTCTACCACTGGAAACGAAATTTTGAAATCAAAGAAGGCATTCAGTGGCCAGGAAGGGAGCCTTGCAATATCAGAAACGCTATTACAAGAAACAAATGATACTTATAAAAAAAGTGTTGGTTCTAGTTCTACCTCTCACAAGGATTTGATAGATAGAAGTTCCCTTAAATATACTGGGAATTTAAGAATTGAAGACAGTGAACGGACTTCAAGTACCAAGATGAAGGGCATGGAAGTGAAAAATGTTTTGAGTTCTGTTCAGGGAGCAGAGGAGCAGCAACACCAAAAAGGAGAGAAGATCATTACACAAGCTAATGTTGAAGATACATCTATCCTGAAGTCTAGAACCAGATTAAAGAACATGGAAGAAAATTTGAACATAAGCTCAGATTCAAGGGGTACATGGCTTCAAACAGATAAAAGGACAAGTCAGAGTTTCCAGCACAGGAAAGGATCTGAACTTGTCAGCATTTTATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTTTCAAGTCCTCAAAAAGCTCATGAGAAGATGAAATTCATTCCAAAAAGTAAACCAACATCAGTTGTTAAAACAAGAGAAAGTTCTAGCCAAACTGATAAATGGATTGCAAATCTATCAATTTCTGATGAAACCACCTCAAGAGAGGAATCCAGTTTGCAGGGATCATTGAATTTGGTTTCTGGGTATGGAAAACATGTTATGTTAGCAGCAGGTGAAGAAGGGGGCTCTGCAACAATGTTGATCCCTTCCTCTTCAGAAGTGGGTGGAGGCTCAGCACATGTTGAACTCACTGCAGGAATTACAAACCCAAATGTCTTCCTTGAAACTTCGAAAAGTGGATCTTCTGCTTTTTCTGATAATTCAGGAAGAAGTTCTGCTTTGCATCCGGATGCTCTTGGTTCAGCTGATCTTTCAGAGAAATCATCTAGGCAGTTTGTCGATGAGTTTGCTGAGAGGATCAGGCATGAAATAACAACTTCCAAAGCACAAGAGATGGAAGTTACAGGACCAAGGTTGACACTTGAAGTTGGTGGTAATCAGATCTACAGCTCGAGACAACAAGGAACTAAAACAGATGTTCAGTCAAAGGAGCATGATTCTAGTCGTTCCTCTGGGTTTCCTGGGACCAAAGGTCCTTCTGATGAGATTTGGGATGTCACTGAACCATCTATTGAACAAGGTCTAGTAGCCAAAGAAACAGAGACCAGCAAAGAAACCGGGAAAACGGTCATTGGTAGAACTGGGAGGTCTTTATGGGGTATAATTTCTGATATTGTTCGATTACGTTGGGGTTCACGTGCTGGTTCCTCAACATCAGCTGGAAAATCTGCTGAGAGAAACTCACCAAACAAGTCCGAAAGTGACACATGGTTTTCTGGGCAGGAGCACGAGGAAACCACTAAAACTAATGTCATAGACGAAACAAGTGTACTGCCTCAAGCCATGATTTCTGATAAGTTAAAACTAGGTAGTGATTCTCACAATAAACTGAAGGACAAAGGAAAACATCTTGAAATTGGATCGTCATCACTGAACATATTGGAAAGTGGATCAGTGTCGGTAGGTGCCTCTTATACTTCTGGAGAGGAAAATGCTAATTGGACTGAAGATAATAAAGATTTGAAAGCCACTAATTCTGGCACACAAAACATGGAATTACCGATTTCAATACCTGCAAGAGGGCCTTCTATTGCTGGAGAAACTGTAAGCATTGGTGGATCTGACATGTCTGGAGGAGCTCAGTTAGTGGGGCCAGTCAAGGATTTTGTAGCTCCTTTGCAGTCTGAGTTGTCTGGCTCAGAGAGAAAGGATAGAGAGTTAAAGCAAAGGATGCTTCAACGGAACAAGCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACGTGAACATGAACAGCGGAGAATAGATGAAATGTTCATGAATGAAGCACTTTTGGAAGCTAAGAAGGCTGGTGATACATGGGAGGTCCCTGTTGGTGCTGTTCTAGTGCAGCATGGGAAAATTATTGCTCGAGGGTGCAACTTAGTGGAAGAATTACGGGACTCCACTGCTCATGCAGAAATGATTTGTATACGAGAAGCTTCAAACCTTCTTCGGACATGGAGACTATCTGGCACCACACTTTATGTAACGCTTGAACCATGTCCTATGTGTGCTGGTGCTATCCTTCAGGCAAGAATAGACACTCTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCGGACGGAGGAGAAAATGCATCAGAAGCAAGAGATGTGCCACCTGCCCCAATTCATCCATTCCATCCAAAGATGAAAATAAGAAGAGGGGTCTTAGCCACAGAGTGTGCAGATGCAATGCAGCAATTCTTTCAGCTAAGAAGGAAAACGAAGAAAGAGGAAACCCCAAAGGACCCTTCTTGTCTCCCTGTTTCTCACCACCACCCTTCCAAAATACTCAACAAGATACATGACGTTTTCCACATAATGTTCTGTTTATAA 3882 0.4091 MYNAYVSPTVYAVRCRETFSLSFNGYSNFCPERFDGTPSYCLSCCGCCDCCSASTYRVPVKSCLVNGLRQSALLQLSATRRLILGGGDHYLSRLPAYGFLRDCQELNSSVNEKTICNSSRRSIKGRCIRVTTQKGRKFSHSFGPDDFEAVLSLLNEEADREATICSKCKDVFSSKRMEAEKARKSVRREGHLNSGEKVKSEKAGDLKQHQSSTIELRREYEKPNKEREAFANNENHRKRRNVSSGSSYYSLSSGDFGSELEAQDEIGLEELSLEIEKGKGNGVEEQVKEQVKEEFKGQRDDSKKLLGVSNKERFASGEDIDWSIRKKTEKKLTQGTLQNTESTKEQHDMYLGGFKTHESGHKRLSVSQNQVNSEEDKSSFVDYLDKKTNKSYLQTVNRRKHQSIDIQESDCNEVEKSSLSQKVLSGREGKLEISEISLKKTTDEREKIVGSTSTTGNEILKSKKAFSGQEGSLAISETLLQETNDTYKKSVGSSSTSHKDLIDRSSLKYTGNLRIEDSERTSSTKMKGMEVKNVLSSVQGAEEQQHQKGEKIITQANVEDTSILKSRTRLKNMEENLNISSDSRGTWLQTDKRTSQSFQHRKGSELVSILSEGYASDEKQVSSPQKAHEKMKFIPKSKPTSVVKTRESSSQTDKWIANLSISDETTSREESSLQGSLNLVSGYGKHVMLAAGEEGGSATMLIPSSSEVGGGSAHVELTAGITNPNVFLETSKSGSSAFSDNSGRSSALHPDALGSADLSEKSSRQFVDEFAERIRHEITTSKAQEMEVTGPRLTLEVGGNQIYSSRQQGTKTDVQSKEHDSSRSSGFPGTKGPSDEIWDVTEPSIEQGLVAKETETSKETGKTVIGRTGRSLWGIISDIVRLRWGSRAGSSTSAGKSAERNSPNKSESDTWFSGQEHEETTKTNVIDETSVLPQAMISDKLKLGSDSHNKLKDKGKHLEIGSSSLNILESGSVSVGASYTSGEENANWTEDNKDLKATNSGTQNMELPISIPARGPSIAGETVSIGGSDMSGGAQLVGPVKDFVAPLQSELSGSERKDRELKQRMLQRNKQVLRDRFDDWEEAYQREHEQRRIDEMFMNEALLEAKKAGDTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRTWRLSGTTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPDGGENASEARDVPPAPIHPFHPKMKIRRGVLATECADAMQQFFQLRRKTKKEETPKDPSCLPVSHHHPSKILNKIHDVFHIMFCL 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01728 1293 CDD nucleoside_deaminase 1098 1205 - -
Vian10g01728 1293 Gene3D Cytidine Deaminase, domain 2 1081 1267 - -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 887 926 - -
Vian10g01728 1293 SUPERFAMILY Cytidine deaminase-like 1083 1259 IPR016193 GO:0003824
Vian10g01728 1293 MobiDBLite consensus disorder prediction 797 838 - -
Vian10g01728 1293 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1092 1214 IPR002125 -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 732 762 - -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 179 241 - -
Vian10g01728 1293 FunFam tRNA-specific adenosine deaminase 1086 1266 - -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 179 248 - -
Vian10g01728 1293 Hamap tRNA-specific adenosine deaminase [tadA]. 1098 1255 IPR028883 GO:0002100|GO:0008251
Vian10g01728 1293 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1066 1258 - -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 887 910 - -
Vian10g01728 1293 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 1093 1191 IPR002125 -
Vian10g01728 1293 MobiDBLite consensus disorder prediction 732 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01728 Vian-Chr10 28884750 28890858 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01728 10 28884750 28890858 Vian10g01728 10 28884750 28890858 ECH