Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01521 ATGATGGAGGACTATAAGAAGCGGCACCCTCAACAGAAGCAGCATCAACCAACCCATCTTCAGCAACAGCAGAATCGGAACGAGGATTCTGAGAGGATGGAGAGGTACCCGAGGGATTTGCTTCAGGGATTTGCCACGAGAGGTGTTACCCTTAGGGATAATAATATGAATAACGTTAGCGTATCGCAGCCTCTTCATCACCCTCGTCCTGAGCAACAGGACCAGGAGGAGGATGAAGAGCTTGAGTTGAACCTTGGTCTCTCTCTCGGAGGAAGATTTGGGGTGGACAAGAACCCAAAAAAGAAGAAGCTTATGCGTTCTTCTTCTGTGGTGGGGACAATGCCTCTGTTCAGGGAGGACGACGCGGTGGCACCGCCGCTTGCAGCGTTCCCTGCGCTGATGAGAACGTCTTCGCTGCCAACCGAGACGGAGGAGGAGTGGCGGCGGAGGAAGGAGATGCAGACTCTGCGCCGGATGGAGGCCAAGAGACGCCGGTCTGAGAAGCAGAAGGGCTCCCGGGAGGCCGTTGCTGGTGGCTGCGCCGCCGCTGAGGAGGTGGAGGGTGGCAGTGTGGTGGCAATGGGGTTGACCAGATTTGGTTCTGCCACGTTGGCTCCGCCCCCTCTAGGGTGGGGTGTGGCGGCGCCAAAGCAGGTTGTTCTTGGCGATGTGTTGGGGAAGGGAAAAGGTTTTCAAGGTCTGTTTGGGCAGCCATCTTCTCAGGGTTCGGCAGATTCGCAAGGAGGAAGCTCTTCATCAGTGTCCGAAATGGATAGCAAGGCTTTTTTAGGATCAAATAGTTGTGGTGGTGAAGCAAGCCCTGCTAGTAATCAATCAGCACAAGATGGTGTGGGTATAGGGGCCAAGAGAAATGAACATGTGGCTCGAAGTTCCAAAGCAGAGGTGGAGAATCCATCTAAGAAAACTCATCATTCACAGAACATAATGGGAAAGCAAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTGTTTACAAAAGGGGATGGTCCTAATGGAAGAAGGATTGAGGGAATATTGTACAAATATGGTAAGGGAGAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTCCTGTCTCCAGCAGAGTTTGTTAAGCATGCTGGTGGTGGTGATGTTGCACACCCTCTTAGGCACATTGTTGTCAACCCTTCTGCTGCTTCCTTTTAG 1194 0.5209 MMEDYKKRHPQQKQHQPTHLQQQQNRNEDSERMERYPRDLLQGFATRGVTLRDNNMNNVSVSQPLHHPRPEQQDQEEDEELELNLGLSLGGRFGVDKNPKKKKLMRSSSVVGTMPLFREDDAVAPPLAAFPALMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQKGSREAVAGGCAAAEEVEGGSVVAMGLTRFGSATLAPPPLGWGVAAPKQVVLGDVLGKGKGFQGLFGQPSSQGSADSQGGSSSSVSEMDSKAFLGSNSCGGEASPASNQSAQDGVGIGAKRNEHVARSSKAEVENPSKKTHHSQNIMGKQIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAASF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01521 397 PANTHER AFP HOMOLOG 2 36 394 IPR031307 GO:0007165
Vian10g01521 397 MobiDBLite consensus disorder prediction 292 308 - -
Vian10g01521 397 Pfam Putative nuclear localisation signal 133 259 IPR032310 -
Vian10g01521 397 Coils Coil 149 169 - -
Vian10g01521 397 Pfam Tify domain binding domain 356 390 IPR032308 -
Vian10g01521 397 MobiDBLite consensus disorder prediction 1 80 - -
Vian10g01521 397 MobiDBLite consensus disorder prediction 232 314 - -
Vian10g01521 397 MobiDBLite consensus disorder prediction 269 284 - -
Vian10g01521 397 Pfam Ethylene-responsive binding factor-associated repression 76 112 IPR012463 -
Vian10g01521 397 MobiDBLite consensus disorder prediction 48 68 - -
Vian10g01521 397 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01521 Vian-Chr10 25902045 25905362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01521 10 25902045 25905362 Vian10g01521 10 25902045 25905362 ECH