Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02085 ATGACAATTTGttcctcatcttcttcatcatcatcttccgaTAATAACTCGAAGACATGGATCATCCATGGAATTGTAGCTGGTGTTGCAATTGCAGCCGCTGCCTCCGGTGCTCACGCTTACTTCCGTCGATTCAACAAATTCCGTAGCCGAGTCGTTGGCATCATACCTGCTCGATTTGCTTCCTCTCGCTTCTCTGGAAAGCCTCTCGTTCAAATTCTTGGCAAGCCTATGATCCAGAGGACATGGGAAAGGGCAAAGCTGGCAGCTTCGTTGGATCATGTTGTTGTGGCAACTGATGATGAAAGGATTGCTGATTGCTGTCGGAGATTTGGTGCAGATGTCATAATGACATCAGAGTCTTGCCGAAATGGTACCGAGCGCTGCAATGAAGCCCTAGAGAAGCTTgggaaaaaatatgatattgttGTAAACATTCAGGGTGATGAGCCACTTGTTGAACCTGAAATAATAGATGGCGTTGTCAAAGCTTTGCAGGCAGCGCCAGATGCAGTTTTCAGCACAGCAGTTACGTCTTTAAAGCCTGAAGATGCACTTGATCCAAACAGAGTGAAATGTGTGGTTGATAATCGTGGTTATGCCATCTATTTTTCACGAGGGTTAATCCCATTCAATAAGTCAGGGAAAGTCAATCAGCAGTTCCCTTATTTGCTTCATCTTGGGATTCAGAGCTATGATACAAAGTTTCTAAAGATATACCCAGATCTTCAACCTACTCCATTGCAACTTGAGGAGGATTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTATAAGATGAAGGTAATAAAAGTTGACCATGACGCCCATGGTGTTGACACCCCTGAAGatgttgaaaaaatagaatCTCTAATGCGAGAGAGGAACTTATCTTGA 894 0.4139 MTICSSSSSSSSSDNNSKTWIIHGIVAGVAIAAAASGAHAYFRRFNKFRSRVVGIIPARFASSRFSGKPLVQILGKPMIQRTWERAKLAASLDHVVVATDDERIADCCRRFGADVIMTSESCRNGTERCNEALEKLGKKYDIVVNIQGDEPLVEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDALDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDTKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIESLMRERNLS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02085 297 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 1 297 - -
Tsu08g02085 297 Pfam Cytidylyltransferase 54 264 IPR003329 -
Tsu08g02085 297 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 50 292 IPR004528 GO:0008690
Tsu08g02085 297 PANTHER BNAA05G35640D PROTEIN 1 297 - -
Tsu08g02085 297 SUPERFAMILY Nucleotide-diphospho-sugar transferases 52 294 IPR029044 -
Tsu08g02085 297 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 41 292 IPR029044 -
Tsu08g02085 297 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 54 285 IPR004528 GO:0008690
Tsu08g02085 297 CDD CMP-KDO-Synthetase 51 290 IPR004528 GO:0008690
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02085 Tsu-Chr8 27670285 27674813 Dispersed