Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02082 ATGGCCACCATCTTCGAATCCATCGCCGTCGTTACTCACCCTTCTTCTGCCATATCTCCTGTCGTCGCCCACCGGAGTTCTCCCAAGTTCCCTCGTTACGTGGGCCTCAGGCCCAAACCCAAGCCCAGGCCCATATTCTCCACTCACTTTGCTGCTTCGCCTACTTCCAGAATCGCTAGTCGCACTTTACGCGTAGTGTGCGAAGCTCAAGATACTGCTGTCGATGTGGTTTCTATCACTGATGCAAATTGGCAATCACTTGTACTTGAATCTGATTCTCCAGTTTTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCAGAATGATCCACCCAATAATTGATGAACTAGCAAAGCAATATGCTGGGAAAATCAAGTGTTACAAACTCAATACCGACGAGAGCCCTTCAACTGCTACTCGGTATGGGATTCGAAGTATCCCAACTGTTGTGATCTTCAAAGATGGTAAAGAAAAAGACACAGTTATTGGAGCTGTCCCCAAGTCAACACTGACATCAAGCATAGAAAAGTTTCTTGCTGCAAATGCTCCTCCACCGAAAAGAGGGCGTCGTGGTAGGCAAGGACCTCCAGTGCGAGGAACACATGATTCGGAAGCGGGTGGTTCGGGTGGTTCGCGTTCACGCGCAGGTCCACCGGTGCCTGATGATGACGATGACTTTGATGCCGGTGAATATTTAAATGAGCTTGCTGATTATGATGACGAACCTGAAGCaccacaaccacaacaacaacctcaacatGATccacaagaagcaaatgtagaAGAAGATGGTTATTCAGGAGGACCGCGTGATTTGTCCTTGCTAAAAGATACCATAACCATCGGGCAATTCCGTGCGAATAAGGTTATAAAATTCCAAAGACCTCCTCTCGAGGTGGCGCGGTTTTGGGATACAGTTAGAGCATCGGGGTTGGAGCCGCTTGTCCGGAGCAATTTTAACATACTTGACTATGGGGTTCTCTGGTCTTTTGTTGAACGATGA 1005 0.4617 MATIFESIAVVTHPSSAISPVVAHRSSPKFPRYVGLRPKPKPRPIFSTHFAASPTSRIASRTLRVVCEAQDTAVDVVSITDANWQSLVLESDSPVLVEFWAPWCGPCRMIHPIIDELAKQYAGKIKCYKLNTDESPSTATRYGIRSIPTVVIFKDGKEKDTVIGAVPKSTLTSSIEKFLAANAPPPKRGRRGRQGPPVRGTHDSEAGGSGGSRSRAGPPVPDDDDDFDAGEYLNELADYDDEPEAPQPQQQPQHDPQEANVEEDGYSGGPRDLSLLKDTITIGQFRANKVIKFQRPPLEVARFWDTVRASGLEPLVRSNFNILDYGVLWSFVER 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02082 334 TIGRFAM thioredoxin: thioredoxin 80 178 IPR005746 GO:0015035
Tsu08g02082 334 PRINTS Thioredoxin family signature 95 103 - -
Tsu08g02082 334 PRINTS Thioredoxin family signature 143 154 - -
Tsu08g02082 334 PRINTS Thioredoxin family signature 103 112 - -
Tsu08g02082 334 MobiDBLite consensus disorder prediction 223 242 - -
Tsu08g02082 334 Gene3D Glutaredoxin 75 183 - -
Tsu08g02082 334 ProSiteProfiles Thioredoxin domain profile. 67 180 IPR013766 -
Tsu08g02082 334 Pfam Thioredoxin 76 176 IPR013766 -
Tsu08g02082 334 CDD TRX_family 82 176 - -
Tsu08g02082 334 ProSitePatterns Thioredoxin family active site. 96 114 IPR017937 -
Tsu08g02082 334 PANTHER THIOREDOXIN M-TYPE PROTEIN 2 179 - -
Tsu08g02082 334 MobiDBLite consensus disorder prediction 177 272 - -
Tsu08g02082 334 PANTHER GEO12009P1 2 179 - -
Tsu08g02082 334 SUPERFAMILY Thioredoxin-like 70 182 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02082 Tsu-Chr8 27589894 27596688 Dispersed/Wgd