Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01765 ATGAGGCCGTCGATGTTCAGATCCGTCCAATCAGCCGTGTCCCGTACCTCCTCTCACCTAACCCGCCGTGGCTATGCTACCGAACCAGTTCCAGAACGCAAGGTGGCCATTCTCGGCGCTGCCGGTGGGATCGGTCAGCCTCTCTCTCTTCTTATGAAGCTCAACCCTCTCGTTTCAACCCTATCTCTTTATGATATTGCTGGAACTCCTGGTGTCGCCGCTGATGTCAGCCACATCAACTCCAGATCTGAGGTAACTGGGTATGCAGGTGAAGAAGAGCTTGGAAAAGCTTTGGAGGGTGCTGATGTTGTTATAATTCCTGCCGGTGTGCCCAGAAAGCCTGGAATGACTCGTGATgatcttttcaatattaatgCCGGCATTGTCAAGTCTCTTGCCACTGCTATTTCTAAGTACTGCCCCCATGCCCTTGTTAACATGATAAGCAACCCTGTGAACTCCACCGTTCCCATTGCTGCAGAGGTTTTCAAGAAGGCTGGGACATATGACGAGAAGAGATTGTTTGGGGTTACAACCCTTGATGTAGTCAGGGCAAAAACTTTCTATGCTGGGAAAGCTAAAGTTCCAGTTGCCGATGTCAATGTACCTGTTATAGGAGGCCATGCAGGAGTTACTATTCTCCCATTATTTTCTCAGGCAACACCTCAAGCCAATCTGGATGATGATGTCATTAAGGCTCTAACGGCAAGGACACAAGATGGAGGAACGGAAGTTGTGACTGCCAAGGCTGGAAAGGGTTCTGCAACTTTGTCAATGGCTTATGCTGGAGCCATATTTGCTGATGCTTGCCTAAAAGGTCTGAATGGAGTTCCAGATGTTATCGAGTGCTCATATGTGCAATCCAATCTCATCGCTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGATTGGGAAGAATGGTGTGGAAGAAATTCTGGGCCTAGGTTCTCTCTCAGATTTCGAGCAACAAGGCCTTGAAAACCTCAAGGCTGAACTCAAATCATCTATCGAAAAGGGAATCAAATTTGCCTCCCAATAA 1038 0.473 MRPSMFRSVQSAVSRTSSHLTRRGYATEPVPERKVAILGAAGGIGQPLSLLMKLNPLVSTLSLYDIAGTPGVAADVSHINSRSEVTGYAGEEELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLATAISKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKAKVPVADVNVPVIGGHAGVTILPLFSQATPQANLDDDVIKALTARTQDGGTEVVTAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVIECSYVQSNLIAELPFFASKVRIGKNGVEEILGLGSLSDFEQQGLENLKAELKSSIEKGIKFASQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01765 345 SUPERFAMILY LDH C-terminal domain-like 177 343 IPR015955 GO:0003824|GO:0016616
Tsu08g01765 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 176 IPR036291 -
Tsu08g01765 345 PANTHER MALATE AND LACTATE DEHYDROGENASE 1 344 - -
Tsu08g01765 345 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 34 343 IPR010097 GO:0006099|GO:0030060
Tsu08g01765 345 PANTHER MALATE DEHYDROGENASE 1 344 - -
Tsu08g01765 345 MobiDBLite consensus disorder prediction 1 23 - -
Tsu08g01765 345 PIRSF Lac_mal_DH 29 343 IPR001557 GO:0016616|GO:0019752
Tsu08g01765 345 Pfam lactate/malate dehydrogenase, NAD binding domain 34 176 IPR001236 GO:0016491
Tsu08g01765 345 MobiDBLite consensus disorder prediction 1 26 - -
Tsu08g01765 345 Gene3D - 32 177 - -
Tsu08g01765 345 Gene3D - 178 344 IPR015955 GO:0003824|GO:0016616
Tsu08g01765 345 ProSitePatterns Malate dehydrogenase active site signature. 177 189 IPR001252 GO:0006108|GO:0016615
Tsu08g01765 345 CDD MDH_glyoxysomal_mitochondrial 34 343 IPR010097 GO:0006099|GO:0030060
Tsu08g01765 345 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 178 342 IPR022383 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01765 Tsu-Chr8 21465726 21469167 Dispersed