Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01731 ATGGGTAGTGATGCAATGAGAAGCAAAGAGTACTGTGCGCTGAAGGATTTAGAATTcaattttaatgaatatgatGATGGAAATTTCTCTTTCTGCTTTTGGATTTATTTGATGAATTCTACTACATTTCCTGCTATCATTCTTCATCAGATTCACTCTGACATTTCTGAAAGTGGTCCTTTTCTCATTATTAACGGTAATAAGAGAATCAATGTTTTACCAGTTCTTTACTTACACCAAGAAGCTCCTGCTACTTGCTCCGGTCCTTGGACAGAAGTTCCACATGTTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTGAGGTTTCTCCAGATTATATTCGGCTTCAAATTAATGGGGACATTGTAGGAGAGAAGTCACTGTCGGAATCCAATTCAAGAAATTTGAAGGATTTACATTTGGCAAATCGTTGTGGAGACATAAGTGGTGTGCAGGGTTATGTCCACAATTATGAAGGATTCCATACTGTTTCTTCTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAGTTATCAATAGATGAATCATCTGTCTCGGAGGTTGAAGAGGAAAGTGATGGTGTTTGGGGCATTGTTGGTGGCAAAGCATCTTGTCGCAGGAATTTCTCATTAGACGTTGTTTTATCAGATGCATTTGGACAACCTGTAGATAAGGGGGATGAGGTTTTTGCTTCTCTTGTGTATGCTGACACGGGGACTCCAGTGGAGAATACAAGTGATAACGAAGCACCCCTATTGTGTAGCTATGATGGAATTGAATTTTCTTCTTGGGAAAGACCTAGCAAGTTTTTGTTGGGTCGTGCATCATTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTTCCAAAATTTGGAAATTATCCTTTCCTTCAGACAAACACCCGTCCAATTCGATGCATCTCCAGAAGCCGTAACACAAAATTATCCACTTTGGTGTGGAAAAAGTCAACCTATGCTCTCCAAAGACTCAATTTGTCACAATCTTCAGCAATTGGTGATGTGTCATTGGAACATGTGAATTCTGGTCATGTAGAAAAAACCAATCCACTGATGAAGCGGTTTAGAGTTGGATTTGACAAGATATCTGTATCAGTTAAGGCTGACACCCCCACCTTAAAGCAATCTGGTGTCGAATTTAATTCCCATGTACGGCCTGCTAATCAGGTTGATAATGGGTTTCCGACAAGCTTGGATGGACGATCTCTTCACGTTGAAGAAGCAGATGACACTCCATCTGAATCATCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAACAGTACGGAATGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTGGCAGGCTTGGCTGAGAGATCTCAGATGCTTAAAGAAATTGCCACATCTGCTTCTGACAAAGAAATTTCAGAGTTAGCTCATCATGTTTCACACTATTCAGGATGTTCCCACCTTGGAAACCAAATATTAATTGCAAAGAGATTGATAGAGGATGGAACTAATCTTTGGTTGGCAATGTCTCCAAGCAATCACCCCGTTCCTTGGGAGAGTGCAGTGTATGAGATTGAAGAACAATTCATGAAGATTGCTTCTTGTGGATCAAGATCTCTCTCTCGTCAGGACTTTGAGATTCTAAGAAGGATTGCTGGATGTCACGAGTATTTAACACAAGAAAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTAGCTTGTGTAATATCCAGGGACTGGGTAAATCCTATCTGGAACTCCATTTCTCCTAAATGGATTGAAGGATTCATCACCAAGGAGGAAGCAGAAGCTTCACTTCAAGGTCCGACAGGATTTCAAGAACCTGGTACTTTTATACTTCGGTTTCCCACCTCAAGAAGCTGGCCCCACCCAGATGCCGGTAGCCTAATTGTTACTTATGTTGGTAATGACTACAAACTGCGCCACAGATTACTTTCAATGGATCATATATATGGCTCTGGTAATCAAAGAATTGATGTAAAGCCATTGCAAGATATGCTACAGGCAGAACCTGAGCTGTCTCGGTTGGGAAGGATAATGAGAATTTATTAA 2133 0.4023 MGSDAMRSKEYCALKDLEFNFNEYDDGNFSFCFWIYLMNSTTFPAIILHQIHSDISESGPFLIINGNKRINVLPVLYLHQEAPATCSGPWTEVPHVTVDFEFPLEKWVHVGCEVSPDYIRLQINGDIVGEKSLSESNSRNLKDLHLANRCGDISGVQGYVHNYEGFHTVSSIKDHHLKDPPLKLSIDESSVSEVEEESDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVDKGDEVFASLVYADTGTPVENTSDNEAPLLCSYDGIEFSSWERPSKFLLGRASFKLRISQLSSKCDNRLFLIRFCVPKFGNYPFLQTNTRPIRCISRSRNTKLSTLVWKKSTYALQRLNLSQSSAIGDVSLEHVNSGHVEKTNPLMKRFRVGFDKISVSVKADTPTLKQSGVEFNSHVRPANQVDNGFPTSLDGRSLHVEEADDTPSESSESIGERNSPSNSTECRRYPISDMTIFKYCLAGLAERSQMLKEIATSASDKEISELAHHVSHYSGCSHLGNQILIAKRLIEDGTNLWLAMSPSNHPVPWESAVYEIEEQFMKIASCGSRSLSRQDFEILRRIAGCHEYLTQENFEKLWCWLYPVACVISRDWVNPIWNSISPKWIEGFITKEEAEASLQGPTGFQEPGTFILRFPTSRSWPHPDAGSLIVTYVGNDYKLRHRLLSMDHIYGSGNQRIDVKPLQDMLQAEPELSRLGRIMRIY 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01731 710 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 6 705 - -
Tsu08g01731 710 MobiDBLite consensus disorder prediction 428 454 - -
Tsu08g01731 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 155 IPR013320 -
Tsu08g01731 710 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6 705 IPR001217 GO:0003700|GO:0006355|GO:0007165
Tsu08g01731 710 Gene3D SH2 domain 600 706 IPR036860 -
Tsu08g01731 710 ProSiteProfiles Src homology 2 (SH2) domain profile. 612 710 IPR000980 -
Tsu08g01731 710 MobiDBLite consensus disorder prediction 440 454 - -
Tsu08g01731 710 SUPERFAMILY SH2 domain 607 698 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Tsu08g01731 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01731 08 20957654 20968548 Tsu08g01731 08 20957654 20968548 ECH