Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01727 ATGGAACCACCGACATCCTCCTCCTCCATCGCCGCCACATCTTCAAAGCCGCGAAGTTACTGGCGATGGAGCAAGCAAGATTTCTTCCCTGAACCATCTTTCCAAACCGGAAAAACTTACCGAGAAGCTTTAGCAAATACTTGTCCACGCCTGAAGGACCGTCTCCTTAACCGATCAACGGATTCTCACGAACTCCTCGTTCTTCCAAAAGCCAGTGAGAATCGCATGGCTCGTTGCCTCACCTGGTGGGACCTAACCTGGCTTGCTTTCGGCGCCGTCGTTGGTTCTGGCATCTTCGTCGTTACCGGTCAAGAAGCTCATTTCCATGCCGGTCCCGCCATTGTTCTCTCTTATGCTGCATCTGGTTTCTCCGCTCTTCTCTCCGCCTTTATCTATGCTGAATTTGCCGTTGAAGTTCCCGTTGCCGGTGGTTCGTTTTCGTTTCTAAGAATCGAACTCGGCGACTTCCTCGCTTTCATCGCCGCCGGTAACATCCTCCTCGAAGCTCTCGTCGGCGCGGCCGGTCTCGGTCGTTCGTGGTCTTCCTACTTCGCCACGATGATAAAGAACGACTCGGATTATTTTCGGATCCGAATAGACTCTTTTAAAACCGGTTTCAACTTGCTCGATCCGTTAGCGGTTGTGGTTCTGTTAATTGCTAACGGAATCGCAGCTAGTGGAACTCGAAAAACCTCTATCTTAACTTGGTTAAGTTCAATTGTCACATTTTTTATAATCGGTTTTATCATAATAATCGGTTTTGTTCACGGAAAGTCGTCAAACTTAACGGATTTTTTTCCGTACGGTGCTAAAGGTGTTTTTAACGCCGCTGCTGTTGTGTATTGGTCTTACACAGGTTTTGATATGGTTGCAACTATGGCTGAAGAAACCAAAAACCCTTCTAGAGATATACCAATTGGTTTAATTGGTTCAATGTCAATGATTACagttatttattgtttaatgGCTTTGGCACTTGTGTCTATGGTTAATTACACTGAGATTGATCCTGAAGCTGCTTATTCAGTTGCTTTTGTTCAAATTGGTATGAAATGGGGTAAATATTTAGTTAGTATTTGTGCTTTGAAAGGAATGACAACAAGTTTACTTGTTGGATCAATGGGACAAGCTAGGTACACAACTCAAATTGCAAGATCACATATGATTCCACCTTTTTTTGCACTTGTTCATCCCAAGACTGGAACACCTATTAATGCTACACTTTTGACAACTTTATCAAGTTGTGTTGTTGCTCTTTTTACTAGTTTGGATGTTTTGTCTAGTGTTTTTTCTGTAAGTactcttttcatttttatgcTTATGGCTGTTGCATTGCTTGTGAGGAGATATTATGTGAGGGAAGCAACTGATAAGAGTGATTTATGGAAGGTTCTTtcatgtttgtttgttgttattGGTTCTTGTGTTGTTGGGGCTGTGCTATGGAACTCAGGTTTGTTTGGTTGGATTGGGTATACGGTCGCTGCTTGTGTTTGGTTTTTGGCGACTCTAGTGATGAGTTTTCTTCCGAAGAAGAGGCAACCGAAAGTTTGGGGTGTTCCGTTGGTTCCGTGGGTGCCTTCTTTGTCGATTGCGACAAACCTTTTTCTTATGGGATCATTGGGTTCTATGGCTTTCTTTAGGTTCTTGATTTGTACTGGTGTGATgcttttgtattatttatttgtggGTGTTCATGCTACTTATGATGTGGATCATGGAATTGGTCAAGAATCAAATCAAGATGAGAGAATGGAAAGTGCCAATTGA 1770 0.4169 MEPPTSSSSIAATSSKPRSYWRWSKQDFFPEPSFQTGKTYREALANTCPRLKDRLLNRSTDSHELLVLPKASENRMARCLTWWDLTWLAFGAVVGSGIFVVTGQEAHFHAGPAIVLSYAASGFSALLSAFIYAEFAVEVPVAGGSFSFLRIELGDFLAFIAAGNILLEALVGAAGLGRSWSSYFATMIKNDSDYFRIRIDSFKTGFNLLDPLAVVVLLIANGIAASGTRKTSILTWLSSIVTFFIIGFIIIIGFVHGKSSNLTDFFPYGAKGVFNAAAVVYWSYTGFDMVATMAEETKNPSRDIPIGLIGSMSMITVIYCLMALALVSMVNYTEIDPEAAYSVAFVQIGMKWGKYLVSICALKGMTTSLLVGSMGQARYTTQIARSHMIPPFFALVHPKTGTPINATLLTTLSSCVVALFTSLDVLSSVFSVSTLFIFMLMAVALLVRRYYVREATDKSDLWKVLSCLFVVIGSCVVGAVLWNSGLFGWIGYTVAACVWFLATLVMSFLPKKRQPKVWGVPLVPWVPSLSIATNLFLMGSLGSMAFFRFLICTGVMLLYYLFVGVHATYDVDHGIGQESNQDERMESAN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01727 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 17 583 - -
Tsu08g01727 589 Pfam C-terminus of AA_permease 518 567 IPR029485 -
Tsu08g01727 589 Gene3D Amino acid/polyamine transporter I 75 508 - -
Tsu08g01727 589 PANTHER CATIONIC AMINO ACID TRANSPORTER 8, VACUOLAR 17 583 - -
Tsu08g01727 589 Pfam Amino acid permease 80 514 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01727 Tsu-Chr8 20911569 20913795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01727 1 584 Organic Solute Cotransporters AT1G17120 70.256 0.0 818