Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01682 ATGGCACTTAACAGTGAACAAGGGAAACATGGTGTTTTACTTCTTGTCTTGTGGTTGTGGTTGTTGACTACTAGTACTTCTATCCATGTCAAAGGCGAAACAATTGATAGGTTTTTGAAGGTAGGAGATACACTGGGTCCCTTTTCGTCGTTGTGTTATAAAGAAGGTACATATTGCATGAGTTTTGACCAAGGTCCTGAAAACATCCCCACTTATCTCTACATATATGGCccccaagaaaaagaagattgGGTTGTGTGGATTGCTAACAGAAACCAACCAGTTGAAAGGGATTCTGTAGTTTTATTACTAGACCACTCTGGTATACTCAAAATTGAACCGAAAAATGGGGAACCAGTAATACTTTACGCTTCACCTCAACCTTTTAACAATAGTACTATTGTAGCTACCTTGATGGATACAGGTAACTTTGTGTTACAAGATATTCAGATGAAGACTGTGTTGTGGCAAAGTTTTGATCATCCAACTGATAGTTTGCTTCCTGGAATGAAATTAGGAGTGAATCATAAAACTGGTGAAAAATGGTCACTGGTTTCAGGACTCAGTGATTCTGTCCCAGCTCCTGGTCCATTCAGGCTTGAGTGGGAACCTATAAGTAAAGAATTGGTCATCAAGAATagagaaaatatttattggAAAAGTGGAGAACTGATGAATAACAATAGATTTCAGTACATATCTGGTGAAAATTTTCGGTACAAAATTGTGTCTAATAAGGATGAAGAGTACTTCGCATACACAACACCAAATAAAGACCTTACTATATGGAATTTATTAGAAACAGGACAACTTATTAACAGGATAGGAACTGACATAGCAAGGGCTGATTTGTGTAATGGGTATAACACTAATGGGGGGTGCCAAAAGTGGGGTGAGTCCAAGATATTACCTATTTGTAGGAATTCTGGTGATACCTGCTTTGGACACAAAACCTTTTATGATAATGGAACTGGTTGTGTCTTCTTGCTATCAACAAAAGGACTTAACGTTGCAAGCAGTGGTGATTACTTATTTTACATTCTAGTAAAGAACACCGATCACAAAGAAATTACAGTATACAAGAAAGGTCAAAATAACAAGTGGATATGGATTTCCGCTGGAATGGGGACTGCTCTACTCATTATCGCCCTTTCCATTCTGTTTCAAGCCTTAAGGAAACGAAAATATGCGCTTCGAGAGAAGGAAAGAATGAAAATGCAGATAGAAATTCAAGACCTTGAAGCTTCTAGGCGATACTCTGATGCCGGTGATCTAGAAGGCGACTTAAGCAATGGAGATGACTTAAAATTATTTAGCTATTCAACAATAATTGTTGCTACCAATGGCTTTTCATCAGAAAACAAGCATGGGAGCTATGGAAAGAAGGTGTGGTTTCTTCAATTGGTGGATCCATTCCTAAACGAGTCATTTTCAGAGGATGAGGTGCTAAGATGTGTGCATGCTGGTTTATTATGTGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCCAATGTTATATCAATGttaacaaacaaaatcaaagcGGATGTTTTGCCTAAGAAACCAGCTTACTACGGTAGAACAAGAGTCTTTGAGGAAGAAACGTTTGCCGAAGAATTGGGTGTGGATTCCACATATTGA 1644 0.3735 MALNSEQGKHGVLLLVLWLWLLTTSTSIHVKGETIDRFLKVGDTLGPFSSLCYKEGTYCMSFDQGPENIPTYLYIYGPQEKEDWVVWIANRNQPVERDSVVLLLDHSGILKIEPKNGEPVILYASPQPFNNSTIVATLMDTGNFVLQDIQMKTVLWQSFDHPTDSLLPGMKLGVNHKTGEKWSLVSGLSDSVPAPGPFRLEWEPISKELVIKNRENIYWKSGELMNNNRFQYISGENFRYKIVSNKDEEYFAYTTPNKDLTIWNLLETGQLINRIGTDIARADLCNGYNTNGGCQKWGESKILPICRNSGDTCFGHKTFYDNGTGCVFLLSTKGLNVASSGDYLFYILVKNTDHKEITVYKKGQNNKWIWISAGMGTALLIIALSILFQALRKRKYALREKERMKMQIEIQDLEASRRYSDAGDLEGDLSNGDDLKLFSYSTIIVATNGFSSENKHGSYGKKVWFLQLVDPFLNESFSEDEVLRCVHAGLLCVEENADDRPTMSNVISMLTNKIKADVLPKKPAYYGRTRVFEEETFAEELGVDSTY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01682 547 Gene3D Transferase(Phosphotransferase) domain 1 441 526 - -
Tsu08g01682 547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 463 542 - -
Tsu08g01682 547 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 184 IPR036426 -
Tsu08g01682 547 Pfam D-mannose binding lectin 85 186 IPR001480 -
Tsu08g01682 547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 313 460 - -
Tsu08g01682 547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 303 - -
Tsu08g01682 547 Gene3D - 38 206 - -
Tsu08g01682 547 ProSiteProfiles Bulb-type lectin domain profile. 36 159 IPR001480 -
Tsu08g01682 547 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 463 542 - -
Tsu08g01682 547 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 313 460 - -
Tsu08g01682 547 SMART blect_4 36 162 IPR001480 -
Tsu08g01682 547 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01682 Tsu-Chr8 20106966 20110017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01682 465 541 Receptor kinase-like Gene Family AT4G23290 48.052 1.25e-16 81.3