Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01678 ATGATGGAACAATCACGATTCGACAAACAGCTTCAATGCAATACCATGGAACCTAGAAATGAGGAAATCCAGCCTGGATCTCAGTCAGTAATGCAGGACTATCTGGACAGCATGTATGCTAATAAATCAGATGTTAAACAAGTACGGAATTATTCAATACAAACTGGTGAGGAATTTTCTCTTGAATTTATGAGAGACAGGGTAAATCTCACAAAGCCTGTAATTTCAAATGTTGGTGATGCCAATTCTACAACTAATGGTGTGGAACTGAAAGGTGTTCTAGGCATCAGTCAAGCAGGATTTGAGAATGGCTCCGGCGTTTCTATGCTCTCAATAGTTGATAGAGGTTCAACAGAGTTTAACAGACAAAGTACATGGTTACATGGAGACAGAAGCAATTATGGGTCAATTCGATCAACACCAAGTGCTCAATTGCACCAAGACAGTGGTCAATTTGGGCGAGGGTATGGTTCTTACGGTGGCTCGGATAGCTCATCAAGGATGATGAAGTGTCTTTGTAGCTTTGGTGGTAGAATATTACCAAGGCCAGGTGATGGAAAACTAAGGTATGTGGGTGGTCAGACACGTATTCTTCGTCTGAGAAAAGACATATCTTGGCCGGAGCTTAGGCAGAGAGCATTGCTAATCTACAACCTGGTTCATATACTAAAGTATCAACTTCCTGGAGAAGATCTGGATGCTTTGGTATCTGTATCATCTGACGAGGATTTACAGAATATGATGGAGGAGTATAATCTTATAGAAGATAGAGACCCCCCACAAAAGCTtaggatttttttgttttcaatgaGTGATTTAAAAGATGCTCAGTTTGCTCTCAGCAGCATTGGTGATGATTCTGAGTTCCAGTATATTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAATAACTCAACCCCACTTGGCGTCAGCATTTCAGCCAATGGTATACGTGAATTTGACAAAAAAGCTATCGAAAGGGAGACTAGTAATGTTGCTGTAGAATCTATAGGTGTCAGGAATGCTCCCTTGACTAACAAGTCTGACACTCCATTAGCTACCAAATCTTCACAGCAAGTATTACCGACGTCTATTGGTGTCCAGAATCCTCCATCGACTAACAAATCTGACATTCCATTGGATACCCGGTCTTCACAGCAAGTATTACCGACGTCTATAGGTGACAGGAGTGCTCACTTGACTAATAAATCTGACACTCCATTGGATGCCCACTCTTCACAGCAAATATTACCGACGTCTATAGGTGTTAGGAATGCTCCCTTGACCAACAAATCTGGCACTCCATTGGATACCCAGTCTTCACAGCAAGTATTACCGGCGTCTATAGGTGTCAGGAATGCTCCCTTGACTAACAAACCTGAAACTCCATTGAATATCCAGTCTTCACAGCAAGTATTACCAACGTCTATAGGTGTCAGGAATGCTCCCCTGACTAACAAACCTGACATTCCACTGGATACCCAGTCTTCACAACAACAAGTATTACCGACGTCTATAGGTGTCCGGAATGTTTCATCGACTAACAAATCTGATATTCCATTGGATACCCGGTCTTCACAGCAAGTATTACCGACGTCTATAGGTGTCAGGAATGCTCCCTTGACTAACAAATCTGACACTCCATTGGATAACCAGTCTTCACAGCAAGTATTACCGACGTCTATAGGTATCAGGAATGCTCCCTTGACTAACAAATCTGACACTCCATTGGCTACCCAGCCTTCACAGCAAGTATTACCGACATCTCCAGATGCTTATGAAACTGATCAGCTGACTTATAGTGACCAAATGACGCAGTCTGCAGAAATTACTCCTCAATATGTTGTTCACCATGGCCTTCATCCCTCTCATAACCCTGTTGTTGGCGAGGCTCCTATTTCTATGGCTCCACATCTTTTGAACAATCAACCAGGGATTCTGAATGAAGACCATCCACCTAGTGgagtacaaattaaaaaatctgAACTATCTACCTCACAGGTGGAAACTATAAGGGATAATTCAGGAAAACAAGGGAGTGACCATGGTAACATTCTATCCTCGGAAACCCCAGCCCTGTCTCCGTCACAGCCCTTTGATGATTCCTTGAAAAATAATGGTCCTGAAGCATCAACTGTAGTTACCGTGCCTGAGGGGCATCTACCTTCGTCCCCTTGCACAAAAAAAGTTCCGCACCAGGATTGTGAAGAGGCCTCTTCTACATCTAGCAGttcatttgttcctaattatgTTGATTCCCACTCCAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCAGTTCCTAAAAGAGTTTACTATTCAGAAAGAGCTCCGAGGGAGCAAGTAGAGGTCCTGAACCGATCCTCAAAGTCAGATGATGCCCACAGCTCGCAGTTTAACGTGTCAGATTTGCTTTCCAACAGCAAGCCAGAGGGTCCAGTAACAGAATCTGGTGAAAACTTGCATGATGGTAATCTGTTAGATCCAGATGAGAAACCAAGTATTTCTGCAAAGCCCTTTCCCGCAGATGACCATACCGTTGACAATGGGTTAGCCACCCATCAAATGAATAAACTGTTGCTTGATACAAACAGCGAGATAAAGTCAAACCTATCTGAGCACATGGGTCCCAAGTTGAAGCAAGCCTTACTGAGTAATGAAGGAATGAAAGACGTGGAAACTAAAGATAACCATACCAAGCCCTTGTTTGATGAAACCGAAACTAAATGCGGTAAATCAGATCTTCCTGCTCTTCATCATGTTTCCTCTGTTGAGCGCCTTGATGTTATAGCATCCAATCTTCCAGAGATTGATTGGGGTGATGCCTATGGGAAGGAATCTAATGATAGCCACATGGTGCAAGAACTACCTGTTTCTTTAGCTGGGAACGTAACAAACGATGTTTCCCCAAATTTTCCCCCAAATGTTTCCAAGCAAGTACAAGGTGACATTCTAATTGATATTGATGATCGATTCCCCCGTGAATTGCTTTCTGATATGTATTCTAAAGCAATACTCCAAGAAGACCTCTCCCGTCAGCACCCATTACCCGCAGACGGAATACGCTATAGTGTAAATATGGAAAATCACGAACCTAAAAGTTGGTCATACTTTGGAAAGCTGGCACAAGGGCTTGACAATGTTTCTCTTATTGATCAAGATCATCTTGGTTTTTCACATCATGCTACACCTCAAACAACTGACAGAGTTCCTCTAGATCATGAGGATTCCCACCTCAATTATGGTGAAGAAAATCAGGACTTACATAGAAGGATTGGAACAGAAACCCATGTTCTGAAGTCAAATTATGATCAATCCCAGCTTAATGACACCAAAAGTATGCAGTTCGATGGAATGTTGGAGAATGTAGGAGCACAAGAGCCCGAGTACAAGGATGGGAAGTTTGTAACCAAAAACTGTAATCTATCTTCACTTGATCCTTCGTCGGGAAATTTTGATATTGGTTCAGTCCAGGTCATTaagaatgaagatcttgaagAGTTGAGGGAGCTAGGTTCTGGTACATTTGGGACTGTGTATCAtggaaaatggagaggatcagATGTTGCtatcaaaagaataaagaagagCTGCTTCACCGGTCGATCATCTGAGCAAGAGAGACTGACTGCAGAGTTCTGGCGAGAAGCTGACATTCTTTCAAAGCTTCATCATCCAAATGTGGTTGCATTTTACGGTGTAGTACAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAATACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGTAAAAGGCTGATTATTGCAATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAACATTGTGCATTTCGACTTGAAATGCGATAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTAGTTACTGGTGGTGTGCGGGGAACTCTACCTTGGATGGCACCAGAGCTGCTTAATGGAAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTCTTCTCCTTTGGCATACTTTTATGGGAAATTTTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAgGTGGCATTGTAAATAACACATTGCGGCCAGCCATTCCCAGCCACTGCGATCTCCAATGGAGAACACTGATGGAGCAATGTTGGGCACCGAATCCTGTAGCCAGGCCTTCCTTCACAGAAATTGCAAGTCGCTTGCGCATAATGTCCGCAGCCGCTAGTCAAACTAAGCCACAGGGAAACAAGCCATCTAAATGA 4350 0.4184 MMEQSRFDKQLQCNTMEPRNEEIQPGSQSVMQDYLDSMYANKSDVKQVRNYSIQTGEEFSLEFMRDRVNLTKPVISNVGDANSTTNGVELKGVLGISQAGFENGSGVSMLSIVDRGSTEFNRQSTWLHGDRSNYGSIRSTPSAQLHQDSGQFGRGYGSYGGSDSSSRMMKCLCSFGGRILPRPGDGKLRYVGGQTRILRLRKDISWPELRQRALLIYNLVHILKYQLPGEDLDALVSVSSDEDLQNMMEEYNLIEDRDPPQKLRIFLFSMSDLKDAQFALSSIGDDSEFQYIVAVNGMDLGSRNNSTPLGVSISANGIREFDKKAIERETSNVAVESIGVRNAPLTNKSDTPLATKSSQQVLPTSIGVQNPPSTNKSDIPLDTRSSQQVLPTSIGDRSAHLTNKSDTPLDAHSSQQILPTSIGVRNAPLTNKSGTPLDTQSSQQVLPASIGVRNAPLTNKPETPLNIQSSQQVLPTSIGVRNAPLTNKPDIPLDTQSSQQQVLPTSIGVRNVSSTNKSDIPLDTRSSQQVLPTSIGVRNAPLTNKSDTPLDNQSSQQVLPTSIGIRNAPLTNKSDTPLATQPSQQVLPTSPDAYETDQLTYSDQMTQSAEITPQYVVHHGLHPSHNPVVGEAPISMAPHLLNNQPGILNEDHPPSGVQIKKSELSTSQVETIRDNSGKQGSDHGNILSSETPALSPSQPFDDSLKNNGPEASTVVTVPEGHLPSSPCTKKVPHQDCEEASSTSSSSFVPNYVDSHSNAIDLSCLHPPPVPKRVYYSERAPREQVEVLNRSSKSDDAHSSQFNVSDLLSNSKPEGPVTESGENLHDGNLLDPDEKPSISAKPFPADDHTVDNGLATHQMNKLLLDTNSEIKSNLSEHMGPKLKQALLSNEGMKDVETKDNHTKPLFDETETKCGKSDLPALHHVSSVERLDVIASNLPEIDWGDAYGKESNDSHMVQELPVSLAGNVTNDVSPNFPPNVSKQVQGDILIDIDDRFPRELLSDMYSKAILQEDLSRQHPLPADGIRYSVNMENHEPKSWSYFGKLAQGLDNVSLIDQDHLGFSHHATPQTTDRVPLDHEDSHLNYGEENQDLHRRIGTETHVLKSNYDQSQLNDTKSMQFDGMLENVGAQEPEYKDGKFVTKNCNLSSLDPSSGNFDIGSVQVIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFTGRSSEQERLTAEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGILLWEILTGEEPYANMHYGAIIGGIVNNTLRPAIPSHCDLQWRTLMEQCWAPNPVARPSFTEIASRLRIMSAAASQTKPQGNKPSK 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01678 1449 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 82 1443 - -
Tsu08g01678 1449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1292 1304 IPR008271 GO:0004672|GO:0006468
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 793 816 - -
Tsu08g01678 1449 Pfam PB1 domain 185 268 IPR000270 GO:0005515
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 343 442 - -
Tsu08g01678 1449 PANTHER SERINE-THREONINE PROTEIN KINASE 82 1443 - -
Tsu08g01678 1449 CDD STKc_MAP3K-like 1173 1430 - -
Tsu08g01678 1449 ProSitePatterns Protein kinases ATP-binding region signature. 1173 1198 IPR017441 GO:0005524
Tsu08g01678 1449 ProSiteProfiles Protein kinase domain profile. 1167 1432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01678 1449 SMART PB1_new 183 270 IPR000270 GO:0005515
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 480 591 - -
Tsu08g01678 1449 Pfam Protein tyrosine and serine/threonine kinase 1168 1430 IPR001245 GO:0004672|GO:0006468
Tsu08g01678 1449 PRINTS Tyrosine kinase catalytic domain signature 1249 1262 IPR001245 GO:0004672|GO:0006468
Tsu08g01678 1449 PRINTS Tyrosine kinase catalytic domain signature 1357 1379 IPR001245 GO:0004672|GO:0006468
Tsu08g01678 1449 PRINTS Tyrosine kinase catalytic domain signature 1286 1304 IPR001245 GO:0004672|GO:0006468
Tsu08g01678 1449 PRINTS Tyrosine kinase catalytic domain signature 1401 1423 IPR001245 GO:0004672|GO:0006468
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 659 713 - -
Tsu08g01678 1449 SMART serkin_6 1167 1433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 784 842 - -
Tsu08g01678 1449 Gene3D - 187 270 - -
Tsu08g01678 1449 SUPERFAMILY CAD & PB1 domains 185 273 - -
Tsu08g01678 1449 SUPERFAMILY Protein kinase-like (PK-like) 1155 1430 IPR011009 -
Tsu08g01678 1449 Gene3D Phosphorylase Kinase; domain 1 1160 1254 - -
Tsu08g01678 1449 CDD PB1_UP2 172 268 - -
Tsu08g01678 1449 Gene3D Transferase(Phosphotransferase) domain 1 1255 1448 - -
Tsu08g01678 1449 MobiDBLite consensus disorder prediction 643 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01678 Tsu-Chr8 20064778 20075480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01678 695 825 MAP Kinase Kinase Kinase AT1G16270 35.333 2.81e-10 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tsu08g01678 PK_Tyr_Ser-Thr 6.5e-62 CL0016