Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01677 ATGTGGCTTTCTTTCTATATGAATGAAAGTGACAACCTTGATTTCCCAATCAGAAGATTTTGTCCTGCAAGAATGGAGCAAGATCAAGGAGAAGAGTGCCATGAACAAGAAACAGTACTTGATCATATTGAATTGTGTACTTTTGATACAACCACAACTCCTTGTTTATTAGCTTCTTCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAGTATGAAGATCAAGAATCTCAAgagaatcatcatcatcgtcgtcaTCAAAGTTTTGATCACTTTGTGgtgaatgaagaagatgatgatgctGATGTTGATGCATACTCCATTGGATATGTTGCAAACACAATGGAGGATGAAGAATTAGAGATCTGTCATAATACCACAATCACAGtggaggaagaagaagttgaaatGAATGGCAATTTTGGTGCTATACCACAGGTACGAGCCAGTATCGGTATGAACCAAGGCCTCGACTTGGTTCATACGTTGCTGGCTTGTGCTGAGGCCGTAGGCTGTAGAGACAACCATCAGGCAAATTTATTACTTAACAAAATTTTGGCTATGGCAAATCCTTCAGGAGATTCATTGCAAAGAGTTTCTTATTGTTTTGCCAAAGGATTGAAGTGTAGGTTATCACTTTATCCTCATAATAATGTTTTTTCAAATGGTGCACTCACAACAAGTGCTTCTAATGATGTTTCTTTGATCACTAGGGAAAATAAGTTGGAAGCTTTTCAACTTCTTTACCAAACAACACCCTACATTACTTTTGGTTTCATGGCTGCAAATGAAGCTATATGCCAAGGATCAAAAGGTAAAAGCTCAATACACATAATTGATTTAGGAATGGAGCAAACTCTTCAATGGTCTTCCCTTTTAAGGAACCTCGCTTCGAGGCCTGAGGGGCCTCCAAGGCTCAGGATAACAGGATTCAGTACGAATGAAGAAAACAATGTGAAACTTCACACTAGCATGAATTTTCTTGTGGAGGAAGCAGTGTCATTAGGAATAGTCCTTGAATTTCGCATAATATCAGAACCGGCAACGCCTTCTTTTCTTACAATTGAGAACCTCAACTTGAGAGAAGGTGAATCTTTATTCGTTAATAGCATCTTAACATTGCACAAATATGTGAAAGAAAGTAGAGGTTATCTAAAGGCAATTCTTCAATCAATCAAGAAGCTAAGTCCAATTGCAGTGACTGTTATAGAGCAAGACACAAACCACAATGGACCTTTCTTTCTAGGGAGGTTTTTGGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAAGCAAGTATGCCAAGAAATAGTCCAATTAGGATGAAAATAGAGAGAGCACATTTTGCAGAAGAAATTTGTAACATTGTTGCTTATGAGGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCATGTAATGCCACTCAAGTGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCATGTGAAAAGGGCTGTCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTCTCATAA 1626 0.3641 MWLSFYMNESDNLDFPIRRFCPARMEQDQGEECHEQETVLDHIELCTFDTTTTPCLLASSEVDDFVDSFINMDQYEDQESQENHHHRRHQSFDHFVVNEEDDDADVDAYSIGYVANTMEDEELEICHNTTITVEEEEVEMNGNFGAIPQVRASIGMNQGLDLVHTLLACAEAVGCRDNHQANLLLNKILAMANPSGDSLQRVSYCFAKGLKCRLSLYPHNNVFSNGALTTSASNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAICQGSKGKSSIHIIDLGMEQTLQWSSLLRNLASRPEGPPRLRITGFSTNEENNVKLHTSMNFLVEEAVSLGIVLEFRIISEPATPSFLTIENLNLREGESLFVNSILTLHKYVKESRGYLKAILQSIKKLSPIAVTVIEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSPIRMKIERAHFAEEICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRPIMMASAWQVASFS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01677 541 Pfam GRAS domain family 162 536 IPR005202 -
Tsu08g01677 541 ProSiteProfiles GRAS family profile. 153 536 IPR005202 -
Tsu08g01677 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 538 IPR005202 -
Tsu08g01677 541 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01677 Tsu-Chr8 20062211 20063836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01677 159 538 GRAS Transcription Factor Family AT3G03450 36.528 1.69e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu08g01677 GRAS 3.3e-107 CL0063