Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01673 ATGGCTACTTCAACCGAATCACCATTCAAATCAAACATATTGAAAGGGAAAGTAGCTTTGATTACAGGTGGAGCATCAGGAATTGGATTtgaaatatcaacacaattcgGTAAACATGGTGCCTCTGTTGCTCTCATGGGTCGTCGTAAACAAGTTCTTCAATCTGCTGTTTCTGTTCTTCAATCACTTTCAATCCCAGCCGTTGCTTTTGAGGGTGATGTTAGGAAACAAGATGATGCTGCCAGAGTTATTGAATCTACTTTCAAGCATTTTGGAAAGATCGATATTCTTGTTAATGCTGCTGCTGGTAACTTTCTTGCTGCTGCTGAAGATCTCTCCCCGAACGGATTTCGAACCGTTTTGGATATCGATTCTGTTGGCACATTCACTATGTGCCATGAAGCACTTAAATATCTCAAGAAAGGGGGACCGGGAAGGAGCTCTTCTAGTGGGGGGGCAATAATAAACATCAGTGCTACCTTGCATTATACAGCTTCATGGTATCAAATTCATGTATCTGCAGCAAAGGCAGCTGTTGATGCCACTACCAGAAACTTGGCACTGGAATGGGGAGCAGATTATGATATTAGAGTCAATGGGATTGCACCAGGTCCAATAAGTGGCACACCTGGCATGAGTAAACTTGCTCCTGAAGAAATAGGTAGCAAATCCAGAGATGAGATGCCTCTATATAAACTTGGGGAGAAGTGGGATATTGCAATGGCTGCTCTCTACTTAGTATCAGATGCAGGAAAATTCATTAATGGCGACACTATGATAGTCGATGGAGGACTTTGGCTGAGCCGGCCTCGTCATTTACCGAAAGAGGCAGTAAGGCAAGTATCGCGAACAGTAGAAAAAAGATCCAGAAATGAACCAATTGGTGTTCCAAAAAGCAAGCTATGA 906 0.4216 MATSTESPFKSNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLSIPAVAFEGDVRKQDDAARVIESTFKHFGKIDILVNAAAGNFLAAAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGPGRSSSSGGAIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGADYDIRVNGIAPGPISGTPGMSKLAPEEIGSKSRDEMPLYKLGEKWDIAMAALYLVSDAGKFINGDTMIVDGGLWLSRPRHLPKEAVRQVSRTVEKRSRNEPIGVPKSKL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01673 301 Pfam Enoyl-(Acyl carrier protein) reductase 23 265 - -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 172 191 IPR002347 -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 194 211 IPR002347 -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Tsu08g01673 301 PRINTS Glucose/ribitol dehydrogenase family signature 146 162 IPR002347 -
Tsu08g01673 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 IPR002347 -
Tsu08g01673 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 IPR002347 -
Tsu08g01673 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 IPR002347 -
Tsu08g01673 301 MobiDBLite consensus disorder prediction 278 301 - -
Tsu08g01673 301 CDD TER_DECR_SDR_a 14 267 - -
Tsu08g01673 301 Gene3D - 1 271 - -
Tsu08g01673 301 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 6 301 IPR045017 GO:0008670|GO:0009062
Tsu08g01673 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 267 IPR036291 -
Tsu08g01673 301 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE-LIKE 6 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01673 Tsu-Chr8 19995552 19999851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01673 6 301 Acyl Lipid Metabolism Gene Families AT3G12800 78.788 6.70e-166 461