Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01610 atgctctACCACAACACAAAAGCCATGATTCATTTCTTGCTACTAGCATCAATGATAGTTGGGATTGGAATGGCAGattcatcaaaagacaaagatgaATGCACAGCACAATTAACAGGGTTAGCATCATGTCTCCCCTATGTTGAAGGTCAAGGAAAATCACCAGCACCAGATTGTTGTAGTGGTCTCAAAACACTACTTAAGACCAACAAAAAGTGTTTGTGTCTAATTATTAAAGATCGTAATGATCCTGATTTGGGTGGTATTGTAATTAATGTCACTTTGGCTTTGGATCTTCCAACTGTTTGTAATGCCCCGGTCAATATCTCAAAATGTCCTGAGCTGCTGCACATGGATCCAAAATCAAAAGAGGCTCAAGTTTTTTATCAATTGAAAAATGGCTCCAGCAATATCGCCCCAAGTGGTGCACCTAGTCCTTCAGATGGAGCAAGCAACCAAGCAAGGAGTACTACACAAAAGAGTGGTGCATTTAGCAAAGATAAGAAATTGTTTGGGTTAGATGCTTTAGTTATTGGGATTTCAGTTTGGTTTTTATTGGTTTCTACGGCTTTTAGATACTAG 582 0.3746 MLYHNTKAMIHFLLLASMIVGIGMADSSKDKDECTAQLTGLASCLPYVEGQGKSPAPDCCSGLKTLLKTNKKCLCLIIKDRNDPDLGGIVINVTLALDLPTVCNAPVNISKCPELLHMDPKSKEAQVFYQLKNGSSNIAPSGAPSPSDGASNQARSTTQKSGAFSKDKKLFGLDALVIGISVWFLLVSTAFRY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01610 193 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Tsu08g01610 193 Gene3D - 31 111 IPR036312 -
Tsu08g01610 193 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 16 186 IPR043325 -
Tsu08g01610 193 SMART aai_6 34 112 IPR016140 -
Tsu08g01610 193 MobiDBLite consensus disorder prediction 140 160 - -
Tsu08g01610 193 CDD AAI_LTSS 41 104 - -
Tsu08g01610 193 PANTHER PROTEIN YLS3-LIKE ISOFORM X1 16 186 - -
Tsu08g01610 193 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Tsu08g01610 193 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Tsu08g01610 193 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Tsu08g01610 193 Pfam Probable lipid transfer 16 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01610 Tsu-Chr8 19101563 19103784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01610 26 187 Acyl Lipid Metabolism Gene Families AT2G44300 49.718 6.09e-57 176