Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01608 ATGGGAGTGGTGATAATAGACGGCACCACCGTAAGAGATTTCATCAACGACGACGCGAGTTTCACAAATAGCGTCAACGAACAATTTCAATCTCTCGATCTTAACAACGACGGTGTTTTATCACGCGCCGAGCTCCGAACAGCTTTCGAATCCATGAGATTAATCGAGGCACACTTCGGCATCGACGTAACAACTCCGCCGGAACAACTCACCAGCCTATATGACTCCGTCTTTGATACTTTTGACGTCGATGGAAGCGGCACCGTTGATCGTGACGAGTTTAAATCtgagatgaagaagattatGCTTGCTATTGCCGATGGATTGGGATCTTCGCCTATTCAGATGGTTCTTGAAGATAATTCTCAGAGTCTTCTTCAGAAAGCTGCTGATCTTGAAGCTTCTAAGTACGCTGCCGTTTGA 423 0.4468 MGVVIIDGTTVRDFINDDASFTNSVNEQFQSLDLNNDGVLSRAELRTAFESMRLIEAHFGIDVTTPPEQLTSLYDSVFDTFDVDGSGTVDRDEFKSEMKKIMLAIADGLGSSPIQMVLEDNSQSLLQKAADLEASKYAAV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01608 140 Pfam EF-hand domain pair 26 98 IPR002048 GO:0005509
Tsu08g01608 140 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Tsu08g01608 140 Gene3D - 11 106 - -
Tsu08g01608 140 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 137 - -
Tsu08g01608 140 CDD EFh 29 99 IPR002048 GO:0005509
Tsu08g01608 140 SUPERFAMILY EF-hand 25 103 IPR011992 -
Tsu08g01608 140 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Tsu08g01608 140 SMART efh_1 73 101 IPR002048 GO:0005509
Tsu08g01608 140 SMART efh_1 24 52 IPR002048 GO:0005509
Tsu08g01608 140 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 137 - -
Tsu08g01608 140 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Tsu08g01608 140 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01608 Tsu-Chr8 19071518 19072204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01608 1 136 EF-hand Containing Proteins AT2G44310 67.647 1.22e-66 197