Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01591 ATGCTGATATTAGTTCTAGGACTAATTTCAGCTACTTTGTTAGTGATTATTGCAATTTATGGCTTTTGTTATATGAAAAGATCATCAAAACATGATATTGAAGACATAGAAAGTTCAGAACAAAAGCATGAAGAGGTGAAAGAGGATTTGATCATTTTTCAAGGTGGAGAAGATTTGACAATATGTGATATATTGGATGCACCAGGGGAAGTAATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTACAAAGAAGTAATAAAGTGAGGTTATTGAGGTTTTTGAGACCGATTTGTACTACAAGAGGTGAAGAATTGgatgaaatgattttgtttcttggaagattaAAACATCCTAATTTAGTTCCTCTTTTGGGATTTTATACTGGACCAAGGGGTGAGAAGCTTCTTGTTCATCCATTTTATAGACATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGTCAAACATATGCACAATATCAATTGGTATAGCAAAAGGAATAGAACATCTTCACACAGAATATGAAAAGCCAATTATTCACGGAAACCTAAAGTCGAAAAACATCCTTTTAGACAGTTCCTATCAACCACACATATCAGATTCCGGCCTCCATCTTTTGTTGAATCCAACTGCTGGCCAAGAAATGCTCGAAAGTTCATCTGCTCAAGGCTATAAAGCCCCTGAACTTATCAAAATGAAGGATGCTAGTGAAGTAACCGATATATACAGCCTCGGTGTAATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCAACTCCTGATGAGGATTTCTATTTGCCGAATTTTATGAGAAATGCGGTTCTTGGACATCGAATTTCCGATTTATATCATCCTGCTATTCTTCTCAGAAACGGCATTGATGATGAAAGTCAAGTTACGGAAGAATGTgttcttaaattttttcaacTTGCTATGGCTTGTTGTTCTCCTTCACCTTCAATTAGACCTAACATAAAACAAGTTATTAGGAAACTTGAAGAAATTGTACACTAG 1056 0.34 MLILVLGLISATLLVIIAIYGFCYMKRSSKHDIEDIESSEQKHEEVKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPICTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNICTISIGIAKGIEHLHTEYEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTAGQEMLESSSAQGYKAPELIKMKDASEVTDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGIDDESQVTEECVLKFFQLAMACCSPSPSIRPNIKQVIRKLEEIVH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01591 351 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 349 - -
Tsu08g01591 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 349 - -
Tsu08g01591 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Tsu08g01591 351 SUPERFAMILY Protein kinase-like (PK-like) 69 347 IPR011009 -
Tsu08g01591 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Tsu08g01591 351 Gene3D Phosphorylase Kinase; domain 1 37 143 - -
Tsu08g01591 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01591 Tsu-Chr8 18835941 18838875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01591 23 349 Carbohydrate Esterase AT5G61570 59.172 8.00e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu08g01591 PK_Tyr_Ser-Thr 2e-30 CL0016