Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01517 ATGGATCATATGAATGTGCCATTGTTGGAGAAGAAGCAATATTATAAGGATTGTCCTGGTTGTAAGGTGGAACAAGAAAAAGAGCTTAATCAAGGGATATCCATTATAAAGCTTTTCATTATTTGGATGGTGGTGTTATCATCTTCACTGCCTATAACATCACTCTTTCCATTCCTTTATTTTATGATTAGAGATTTCAATGTTGCAAAAGAAGAGGCTGATATTAGTTATTATGCCGGTTATTTAGGATCTTCATATATGCTTGCAAGATCTTTCACAGCTGTAATTTTGGGAATGCTTTCTGATCGTTACGGTCGAAAACCTGTTATAATTCTAGGGATCATCTCAGTTGTTATCTTCAACACACTATTTGGCCTTAGTACGAGTTATTGGATGGCTATTATCACGAGATTTCTTCTCGGAAGTTTAAACGGTGTACTTGGACCAGTGAAGGCATATGCTACTGAACTTTTTAGAGAAGAGCACCAAGCTATAGGTCTTTCTACTGTTAGTGCCGCTTGGGGCATTGGTTTAATTGTTGGCCCTGCAATAGGAGGCTATTTGGCTCAGCCAGCAGAAAAATATCCACAAATATTTGCAAAGGATTCATTTTGGGATAAGTTTCCATACTTCTTGCCCTGCTTTATAATATCAGGATTCGCCCTGACAGTAGCAATTGCTTGCATCTGGATTCCGGAAACAGTTCACAATCACAGTGGTAATGAGTCTACAGATGCTGATGTTTTAGAAAATGGAAGCAAAAGagtagagaaagaaaagaatattcAAAAGAATGAAAACCTCTTCATGAATTGGCCTTTAATGTCATCTATCATTGCTTATTGTGTCTTCTCATGTCATGATGTTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTCAGTCCTCCGATGCTAGGTGGGTTGAACTTTACAACAGATGATGTTGGTAATGTTCTTTCAATTTCAGGACTTGCACTTGTGATCTACCAACTTTTCATATACCCATCAGTGGAAAAGGCTTGTGGACCTATCGGCTTTGCCCGCATCACAGGGATATTGTCCATACCACTTTTGCAAAGTTACCCTTTCATAGCAATGTTGTCGGGCATAAGCTTATACATTGTCATTAGTATTGCTTCGATACTGAAGAATGTAATGTCTGTAACAATTATAACGGGCTTATTCCTAATACAAAACCGAGTAGTGGAACAACACCAAAGAGGAGCAGCAAATGGAATTTCTTTGACAGCTATGTCTCTATTCAATGCTATTGGTCCTGCTGCAGGTGGTACAATATTAACTTGGTCGCAAAAGCGTATGGATGCTTCGATCCTCCCCGGCACTCAAATGGTCTTTTTCTTCTTGAATTTTGTTGAAGGACTTGGAATACTTATGCTTTTTAAACCATTCATTGGTCAAAAGAACAAAACACACTCAAATCTGTTACATTGA 1452 0.3788 MDHMNVPLLEKKQYYKDCPGCKVEQEKELNQGISIIKLFIIWMVVLSSSLPITSLFPFLYFMIRDFNVAKEEADISYYAGYLGSSYMLARSFTAVILGMLSDRYGRKPVIILGIISVVIFNTLFGLSTSYWMAIITRFLLGSLNGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIVGPAIGGYLAQPAEKYPQIFAKDSFWDKFPYFLPCFIISGFALTVAIACIWIPETVHNHSGNESTDADVLENGSKRVEKEKNIQKNENLFMNWPLMSSIIAYCVFSCHDVAYQEVFSLWAVSPPMLGGLNFTTDDVGNVLSISGLALVIYQLFIYPSVEKACGPIGFARITGILSIPLLQSYPFIAMLSGISLYIVISIASILKNVMSVTIITGLFLIQNRVVEQHQRGAANGISLTAMSLFNAIGPAAGGTILTWSQKRMDASILPGTQMVFFFLNFVEGLGILMLFKPFIGQKNKTHSNLLH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01517 483 Pfam Major Facilitator Superfamily 41 285 IPR011701 GO:0022857|GO:0055085
Tsu08g01517 483 Gene3D MFS general substrate transporter like domains 36 464 IPR036259 -
Tsu08g01517 483 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 2 481 - -
Tsu08g01517 483 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 474 IPR020846 GO:0022857
Tsu08g01517 483 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 2 481 - -
Tsu08g01517 483 CDD MFS_SLC46_TetA_like 41 468 - -
Tsu08g01517 483 PRINTS Tetracycline resistance protein signature 110 134 IPR001958 GO:0022857
Tsu08g01517 483 PRINTS Tetracycline resistance protein signature 167 189 IPR001958 GO:0022857
Tsu08g01517 483 PRINTS Tetracycline resistance protein signature 79 98 IPR001958 GO:0022857
Tsu08g01517 483 ProSitePatterns Sugar transport proteins signature 1. 97 113 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu08g01517 483 SUPERFAMILY MFS general substrate transporter 38 477 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01517 Tsu-Chr8 17791659 17796574 Dispersed/Proximal