Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01515 ATGGTGGTTTTATCTGCAACACTGCCTGCAGCATCACTCTTTCCATTCCTTTACTTCATGGTAAGGGATTTCAATGTTGCGAAAGAAGAGGCTGATATTAGTTATTATGCCGGTTATGTGGGATCTGCATTCATGCTTGGAAGATCATTAACATCTGTAATTTGGGGAATGGTTTCTGATCGATATGGTCGAAAACCTGTTATAATTATTGGGATAATCGCAGTTGTCATCTTCAACACACTATTTGGCCTTAGTACGAGTTTTTGGATGGCTATTATAACGAGATTTCTTCTCGGTAGTTTAAACGGTGTACTTGGACCAGTGAAGGCATATGCTACTGAACTTTTTAGAGAAGAGCACCAAGCTATTGGTCTTTCTACTGTTAGTGCCGCTTGGGGCATTGGTTTAATTATTGGCCCAGCAATAGGAGGTTATTTGGCTCAGCCAGCAGAAAAATATCCACAAATATTTGCAAAGGATTCATTTTGGGATAAGTATCCATATTTCTTGCCTTGCTTCATAATATCAGGACTTGCACTCACAGTAGTAATTGCCTGCATCTGGATTCCGGAAACACTTCACAATCACAGTGTTAGAAATGAGTCTACAGATGATGCTGAAGCTTTAGAAAATGGAAGCAAAAGagtagagaaagaaaagaatgtcCAAAAGAATGAAAACCTATTCATGAATTGGCCTTTGATGTCATCTATCATTGTTTATTGTATCTTCTCACTTCATGATGTTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCCAAGGCTAGGGGGGTTGAACTTTACAACAGATGATGTTGGTAATGTTCTTTCAATTTCAGGACTTGCACTTGTCATCTACCAACTTTTCATATACCCATCTGTAGAAAAAGCTTGCGGACCTATCGCCTTTGCTCGCATCACAGGGATATTTTCCATACCACTTTTGCAAAGTTACCCTTTCATCGCAATGTTGTCTGGCGTAAGCTTATACATTGTCATTAGTATTGCTTCGATGCTGAAGAATGTTATGTCTGTGACAATTACAACGGGTTTATTCCTAATACAAAACCGGGTAGTGGAACAACACCAAAGAGGAGCAGCTAATGGAATTTCCATGACAGCTATGTCTCTATTCAAAGCTATTGGCCCTGCTGCTGGTGGAACAATATTAACTTGGTCACAAAAGCGTATGGATGCTTCGATCCTCCCCGGCACTCAAATGGTCTTTTTCTTCTTGAATTTAGTTGAAGGACTTGGaataattttgatgtttaaacCATTTCTtggtcaaaagaaaaaaacacactcAGAATTGTTACATTAA 1332 0.3761 MVVLSATLPAASLFPFLYFMVRDFNVAKEEADISYYAGYVGSAFMLGRSLTSVIWGMVSDRYGRKPVIIIGIIAVVIFNTLFGLSTSFWMAIITRFLLGSLNGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIIGPAIGGYLAQPAEKYPQIFAKDSFWDKYPYFLPCFIISGLALTVVIACIWIPETLHNHSVRNESTDDAEALENGSKRVEKEKNVQKNENLFMNWPLMSSIIVYCIFSLHDVAYQEVFSLWAVSPPRLGGLNFTTDDVGNVLSISGLALVIYQLFIYPSVEKACGPIAFARITGIFSIPLLQSYPFIAMLSGVSLYIVISIASMLKNVMSVTITTGLFLIQNRVVEQHQRGAANGISMTAMSLFKAIGPAAGGTILTWSQKRMDASILPGTQMVFFFLNLVEGLGIILMFKPFLGQKKKTHSELLH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01515 443 SUPERFAMILY MFS general substrate transporter 7 438 IPR036259 -
Tsu08g01515 443 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 441 - -
Tsu08g01515 443 Gene3D MFS general substrate transporter like domains 1 425 IPR036259 -
Tsu08g01515 443 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 441 - -
Tsu08g01515 443 Coils Coil 199 226 - -
Tsu08g01515 443 PRINTS Tetracycline resistance protein signature 68 92 IPR001958 GO:0022857
Tsu08g01515 443 PRINTS Tetracycline resistance protein signature 125 147 IPR001958 GO:0022857
Tsu08g01515 443 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 434 IPR020846 GO:0022857
Tsu08g01515 443 Pfam Major Facilitator Superfamily 5 245 IPR011701 GO:0022857|GO:0055085
Tsu08g01515 443 CDD MFS_SLC46_TetA_like 2 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01515 Tsu-Chr8 17777246 17781429 Tandem