Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01513 ATGGAGTGGCTTCTTCAATTCCTTCATCTCTTTTTTTTAGCTTCTCTTCTTATTTCCAACACAACAATTGCAGATCAAATTACTAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAATAAAATTGGATTAGATGAACAAATACCTGAATCAGTTCATTTGGAGTTACTATCATCAATCATTCCAAGtGAAGAAAGTGAGAGGATAGAACTGATTCACCATTACAATCATGCTTTTAGTGGATTCTCTGCCATGCTTACAGAGAATGAAGCTTCTGCATTGTCTGGCCACGATGGTGTGGTGTCAGTGTTCCAAGATCCAATACTTGAATTGCATACAACGAGGTCTTGGGATTTCTTAGATTCAGATTTGGGAATGAAGAAGACTCCAGCTGCCATTACTCACCAAACTTCATCAACTCATGATATAATCATTGCTCTCATTGACACCGGGATATGGCCAGAATCACCTAGCTTCAAAGATGATGGCATAGGGAATATTCCTTCAAAATGGAAAGGAGTTTGTATGGAGGGACATGATTTCAAGAAATCTAATTGTAACAGGAAATTGATAGGTGCAAGATACTATAATACACAAGATACATATGGTAGTAACAAAACTCATGTTGAAGGAACAAAAGGTTCACCAAGAGATTCTATTGGACATGGAACTCACACTGCATCAACCGCAGCCGGTGTATTTGTCAACAATGCAAGTTATTTTGGTTTAGGAAAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCCTATAAAACATGTTCAGAAGATGGTTGTTCAGGTTCCACCATACTAAAGGCTATGGATGATGCTATTAAAGATGGTGTAGATATAATTTCAATCTCTATTGGACTTAGTTCATTGATGCAATCAGATTATTTGAATGATCCAATAGCTATCGGAGCATTTCATGCTGAACAAAGAGGGGTTATGGTTGTGTGTTCAGCTGGGAATGATGGTCCTGATCCTTACACTGTTGTGAATACCGCACCGTGGATATTTACTGTTGCAGCTTCTAATATTGACAGGAACTTTCAGTCAACTATTGTCCTTGGAAATGGGAAAAGTTTCAAAGGCACTGGCATTAACTTCTCAAACCTTACTAGCTCACCGTTGTATTCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTCGCACCAATATCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTATAGCAAAGTAGCAGGCAAAATTGTTGTTTGTGTTGACGATGATCCAAATATTTCAAGGAAAACCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATGGGCATGATATTCGTCAGCGAGGACAATAGAGATGTTTCCTTTGATGCAGGTGCATTTCCCTTCACAGAGATTGGAAACCTTGAAGGGCACCAAATCCTTCAGTATATAAACTCTACCAAGAAACCAACTGCAACAATTCTTCCAACAATAGAAGTTCCTAGATATCGTCCGGCACCAATTGTTGCCTCTTTCTCATCTAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGCCTGATGTAATGGCTCCAGGAGTTTCCATTTTAGCTGCCATGGTTCCCAAAAGTGATGAACCAGGAAGTGTTCCAATTGGGAAAAGGCCATCTTTATTTGGTATAAAATCTGGTACATCTATGGCTTGTCCTCATGTGACAGGTGCTGCAGCTTTCATCAAATCAGTACATGGAAGTTGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAACTTACAATAACATGAAGAAGCCGGTGACAAATAGCTCAAACTACATTGCCAACCCACATGAAATGGGAGTTGGAGAAATTAATCCACTCAAAGCTCTCAACCCAGGTTTAGTCTTCGAAACAGACGTTGAAGACCACATTCGATTCCTTTGTTATTACGGCTATTCTAATAAAACCATAAGATCAGTGTCTAAGACCAATGTAACTTGCCCAAGAACCTCTCATGATCTTATATCCAACATCAATTATCCATCAATCTCTATACAAACCCTTAAAAGAAATCAAAAAGTAAGAATAATCACAAGAACAGTCACCAATGTGGGAACCTTAAATACTACATATGTTGCAAAAGTGCATGCACCTGAAGGATTAATTGTCAAGGTTATTCCCAACAAACTTGTATTTTCAGAAAGTGTTCAAAAAATTACCTATAAAGTTTCATTCTATGCTAAGGAAGCTCATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTAGACATTATGTTCATACACTTCAACCATATTCAATTTCTGGTTTGTTGAAAGGATTTATGATGGAAAACAACAACACTGTTAATACTTCAGAATCAATTGATAAATCTAAGATTGTAGAAGTGAAACCCTTGCGTAGTTTAGCTCCTGTATTACCAAACAATGTGCAATCCTTTTTTTCTGGTCAATACCCATCTGGGTTTTCACCATTTTGTTCATTTGTCAAACCCCAACAAATTCCTGTTCCCAAAGAAACTGTGCAAACTGATGTTGATGGCAATGCAACAGTAGATAGTCCTGTTGCTCCAAAAGCGACACGAGAAACTCCTGTTGCTGCTAAGGTGACTCCAATTAGGTCATACAAGAGTTCACATGATGAAGAAGTGAATGTGAATCGTGATGGAGATGTTGATTCGTTTTCGGAAGGGTTGAATGGTGATGATTGGGGAGAGGGTAGCAGAAAGCGAGGTACGCAAAATATACAGAACTGCAAAGAGTTTCTTAAAaggaagaagaataagaaaacTCGGGAGCCACCCATTGGTGGTTCGAGTTCTTATTTTGCTGCTTTCCCACTTCTAAGAGAGGACGGTGATCGTGAATCAGTTAATTATGTGCTCATGGCATTTGATTCGATTCGAAGAAGGATCTGTCAACTTGAAGAATCGAAGGAACTTAGCAATGCACTTGCCAAGCGTCCGGATCTTAGAGCAAGTCATGCTTTGACGTCTAATGGGATTAAAACAAACACGAGGAGAAGAGCAGGAGGGGTTCCTGGGATTGAGGTTGGGGACATTTTCTTTTTTCGAATGGAAATGTGTCTTGTTGGTTTACATGCTCAGTCAATGGGTGGAATTGATTACATGAACATCAAGGATGGGTCTAAGGATGATACTATGGCGTTAAGTGTTGTATCTTCAGGAGTGTATGGTGATGAATCAAAGGataatgatattttatattatagtgGTTCGGGTGAGAAtttcaacaagaaagataaacATGTGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTAGACAGAAGTGCGCAACGGCACGACGAAGTTAGAGTCATTCGGGGCTTAAGAGATACCGTGAATAGAAGTGCAAAAATCTATATGTATGATGGTTTGTATAAAATCGAAGATTCTTGGATTGAAATGGAGAAATCTGGTGGTGGTGTTTTTAAGTATAAGATGGTAAGGTTACCTGGTCAAAAAAGTGCTTTTGCTTCTTGGATGTTGGCTCAAAAGTGGAAGGCAGATTCCTCTTCAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGAATTGAAAGTATTCCAGTATCACTTGtcaatgatgttgatgatgaaaagGGTCCTGctttttttacttatttcatGTCTCTCAAAAATCCGAAACCTTTTGGTTTAGTGCAGCGTTCTTTTGGCTGCAATTGTAACAAAGCATGTATCCCTGGTGATTTGAACTGTTCATGCATTCAAAGAAACGAAGGTGATTTTCCTTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCACTAATTCATGAATGTGGCCCTATGTGTCAGTGTTTTCCTAACTGCAAAAACCGAGTATCGCAGACTGGTTTAAAACAATACATGGAGGTGTTCAAAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGCGCTGGTACCTTTATTTGTGAGTATGCTGGAGAAGTTATTGATAGAGAAAAGGCATATCAAAATGGGGAAGGAGATACTGATGAATATGTTTTTGATACAAGCCGTATTTATGTACCATTCATGTGGAATCATGATCCTAACTTAATGGAAGAAGTAAGTTCAAATGTTTCAAGCGAGGATTATACTATACCATCTCCTCTAATAATAAGTGCTAAGAATGTGGGAAATGTGGCTAGATTCATGAACCATAGCTGCTCCCCAAATGTGTTTTGGCAGCCAGTTTTATATGCGGAAAACAATCAATCCTTTCTCCACATTGCATTTTTTGCCCTTAGGCATATTCCTCCAATGGCAGAGTTGACATATGATTATGGAGTTGTCCCTACTGGCCGTGTTGCTCACAGAAAGACATCGTACTTGCAAGTCTATTCATGGCTAAATGAGacaaatgaagaaattcATTGTCAAGAGTCAGATCCAGCTTGGAGGTTCCAACTTAGTGTTTGCTTGCTTCCAAATATCACTGTGAAGTATAGATATTCTTGA 4521 0.384 MEWLLQFLHLFFLASLLISNTTIADQITKPYVVYMGNSSPNKIGLDEQIPESVHLELLSSIIPSEESERIELIHHYNHAFSGFSAMLTENEASALSGHDGVVSVFQDPILELHTTRSWDFLDSDLGMKKTPAAITHQTSSTHDIIIALIDTGIWPESPSFKDDGIGNIPSKWKGVCMEGHDFKKSNCNRKLIGARYYNTQDTYGSNKTHVEGTKGSPRDSIGHGTHTASTAAGVFVNNASYFGLGKGTARGGSPSTRIAAYKTCSEDGCSGSTILKAMDDAIKDGVDIISISIGLSSLMQSDYLNDPIAIGAFHAEQRGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTIVLGNGKSFKGTGINFSNLTSSPLYSLVFGEKVAAKFAPISEARNCYPGSLDYSKVAGKIVVCVDDDPNISRKTKKLVLQDARAMGMIFVSEDNRDVSFDAGAFPFTEIGNLEGHQILQYINSTKKPTATILPTIEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVSILAAMVPKSDEPGSVPIGKRPSLFGIKSGTSMACPHVTGAAAFIKSVHGSWSPSMIKSALMTTATTYNNMKKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETDVEDHIRFLCYYGYSNKTIRSVSKTNVTCPRTSHDLISNINYPSISIQTLKRNQKVRIITRTVTNVGTLNTTYVAKVHAPEGLIVKVIPNKLVFSESVQKITYKVSFYAKEAHGGYNFGSLTWLDGRHYVHTLQPYSISGLLKGFMMENNNTVNTSESIDKSKIVEVKPLRSLAPVLPNNVQSFFSGQYPSGFSPFCSFVKPQQIPVPKETVQTDVDGNATVDSPVAPKATRETPVAAKVTPIRSYKSSHDEEVNVNRDGDVDSFSEGLNGDDWGEGSRKRGTQNIQNCKEFLKRKKNKKTREPPIGGSSSYFAAFPLLREDGDRESVNYVLMAFDSIRRRICQLEESKELSNALAKRPDLRASHALTSNGIKTNTRRRAGGVPGIEVGDIFFFRMEMCLVGLHAQSMGGIDYMNIKDGSKDDTMALSVVSSGVYGDESKDNDILYYSGSGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGLRDTVNRSAKIYMYDGLYKIEDSWIEMEKSGGGVFKYKMVRLPGQKSAFASWMLAQKWKADSSSRNGFILADLSNGIESIPVSLVNDVDDEKGPAFFTYFMSLKNPKPFGLVQRSFGCNCNKACIPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCQCFPNCKNRVSQTGLKQYMEVFKTKGRGWGLRTLDPIRAGTFICEYAGEVIDREKAYQNGEGDTDEYVFDTSRIYVPFMWNHDPNLMEEVSSNVSSEDYTIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYAENNQSFLHIAFFALRHIPPMAELTYDYGVVPTGRVAHRKTSYLQVYSWLNETNEEIHCQESDPAWRFQLSVCLLPNITVKYRYS 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01513 1506 Pfam Pre-SET motif 1198 1296 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu08g01513 1506 Pfam Fibronectin type-III domain 675 767 IPR041469 -
Tsu08g01513 1506 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 793 1456 - -
Tsu08g01513 1506 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 793 1456 - -
Tsu08g01513 1506 MobiDBLite consensus disorder prediction 851 871 - -
Tsu08g01513 1506 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 719 1485 IPR025794 GO:0016571
Tsu08g01513 1506 CDD Peptidases_S8_3 110 595 IPR034197 -
Tsu08g01513 1506 Gene3D SET domain 1179 1454 IPR046341 -
Tsu08g01513 1506 Pfam SET domain 1315 1450 IPR001214 GO:0005515
Tsu08g01513 1506 Pfam SAD/SRA domain 1016 1169 IPR003105 -
Tsu08g01513 1506 MobiDBLite consensus disorder prediction 884 918 - -
Tsu08g01513 1506 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Tsu08g01513 1506 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Tsu08g01513 1506 SUPERFAMILY SET domain 1181 1452 IPR046341 -
Tsu08g01513 1506 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Tsu08g01513 1506 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Tsu08g01513 1506 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Tsu08g01513 1506 SMART G9a_1 1012 1169 IPR003105 -
Tsu08g01513 1506 SMART preset_2 1194 1288 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu08g01513 1506 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Tsu08g01513 1506 Gene3D Peptidase S8/S53 domain 143 640 IPR036852 GO:0004252|GO:0006508
Tsu08g01513 1506 Gene3D - 352 496 - -
Tsu08g01513 1506 Gene3D - 645 774 - -
Tsu08g01513 1506 CDD PA_subtilisin_like 358 489 - -
Tsu08g01513 1506 ProSiteProfiles YDG domain profile. 1017 1165 IPR003105 -
Tsu08g01513 1506 ProSiteProfiles SET domain profile. 1304 1450 IPR001214 GO:0005515
Tsu08g01513 1506 Pfam Subtilase family 143 599 IPR000209 GO:0006508|GO:0008236
Tsu08g01513 1506 SUPERFAMILY Subtilisin-like 113 632 IPR036852 GO:0004252|GO:0006508
Tsu08g01513 1506 SMART set_7 1304 1456 IPR001214 GO:0005515
Tsu08g01513 1506 SUPERFAMILY PUA domain-like 1000 1187 IPR015947 -
Tsu08g01513 1506 Gene3D - 999 1178 IPR036987 -
Tsu08g01513 1506 ProSiteProfiles Pre-SET domain profile. 1240 1301 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu08g01513 1506 ProSiteProfiles Serine proteases, subtilase domain profile. 117 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01513 Tsu-Chr8 17662125 17693987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01513 787 1454 Su(var)3-9 homologs AT1G73100 48.605 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu08g01513 Peptidase_S8 2.5e-47 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00176 03 1439009 1440991 Tsu08g01513 08 17662125 17693987 PCT