Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01512 ATGGAGTGGCTTTTGCAATTCTTTCATCTCCTCTTTGTAGCTTCTCTTCTTATTTGTAGTAGTAATAGTATAGAAATTTCAGATCAAATTGCTAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAATAAAATTGGATTAGATGAACAAATACCTGAATCAGTTCATTTGGAGTTACTATCATCAATCATTCCAAGtGAAGAAAGTGAGAGAATAGAACTGATTCACCATTACAATCATGCCTTTAGTGGATTCTCTGCTATGCTTACAGAGAATGAAGCTTCTGCATTGTCTGGAAATGATGGTGTAGTGTCAGTGTTCCAAGATCCAGTTCTTCAATTACATACAACAAGGTCTTGGGATTTCTTAGACTCAGATTTGGGAATGAGGCCTAATAGCATCCTTAAACACCAACACTCATCAAGTGATGATATCATTATCGGTGTGATAGACACTGGGATATGGCCAGAGTCTCCAAGTTTCAGAGATGACGGTATAAGGAAGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATTTAATTGCAATAGAAAATTGATAGGTGCAAGATACTATGGTAAAAAAGATGCCAAAGGTTCACCAAGAGATTTTAATGGACATGGTAGCCACACTGCATCAACTGCAGCTGGTGTCATTGTTACCAATACTAGTTACTATGGTTTAGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTGCAAGGATTGCTGCATATAAAGCATGCACAGAAAAAGGTTGCTTTGGTGGAACATTATTGAAGGCTATTGATGATGCTATCAAGGATGGAGTAGATATAATCTCAATTTCTATTGGATTTAGCTCAGAATTTCTATCAGAATATTTGACTGATCCAATAGCTATTGGAGCATTTCATGCAGAACAAAGAGGTATCATGGTGGTGTGTTCAGCTGGGAATGAAGGTCCGGATCATTACACAGTTGTCAACACAGCACCATGGATATTCACAGTCGCAGCTTCTAATATCGATAGGAACTTTCAGTCAATTGTTGTTCTTGGAAATGGGAAAAGTTTCAAAGGAACTGGCATTAACTTCTCAAACCTTACTCACTCAACAATGTATTCACTTGTCTTCGGAGAGGAAGTTGCAGCCAAATTTACATCAAAAGCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATAACAAAAAAGTTGCAGgaaaaattgttatttgtgtCAACGACGATCAAAATATTACACGGAATATGAAGAAGCTAATTGTACAAGATGCGGGAGCCATGGGGATGATACTCATTGAGAAGGAAAACATAGATGTTCCCTTTGATGCAGGTCTATTTCCCTTCACAGAGGTTGGCAATCTTCAAGGGTATCAAATCCTTAAGTACATAAAATCTACCAAGAAACCAACTGCAACGATTCTTCCAACAACAGAAGTTCCTAGATATAGGCCTGCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTGCAAGCCTTACTGAAAACATTCTCAAGCCGGATGTCATGGCTCCAGGTGTTTCGATATTGGCTGCTTTGGTtcctaaaaaagaaaatgttccAATTGGGAAAAAACCATCCATGTTTGGCTTAAGATCTGGGACATCTATGGCTTGCCCTCATGTGACTGGTGCTGCAGCATTCATCAAGTCAGTACATAGAATTTGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTGCGCCCTACAACAACATGAGGAAGCCGGTGACCAATAGCTCAAACTATATTGCCAACCCACATGAAATGGGAGTTGGAGAAATTAATCCACTCAAAGCTCTAAACCCTGGTTTAGTCTTCGAAACATATGTGGAAGACTACATTAAATTCCTTTGTTATTTTGGCTATTCAAACAAAGACATAAGAAAAATGTCCAAGACTAAAGTCACATGCCCAAGGACCTCAAAAAGACTTATATCCAACATCAATTACCCATCAATCTCAATACAAAAGCTTAAAAGGAAACAGAAAGCAAAAGTGATCACAAGAACAGTGACCAATGTAGGAACCTTAAATACTACATATATTGCAAAAGTGCATGCACCTGAAGGATTAATTGTAAAGGTCATTCCCAACAAACTAGTATTTTCAAAGAGTGTTAAAAGAATTACCTATAAAGTCTCATTCTATGCCAAGGAAGCTCATGATGGATACAATTTTGGGTCTCTAACATGGCGCGATGGCCGACAATATGTTCACACAGTATTTGCAGTCCAAGTTGAATAA 2292 0.3796 MEWLLQFFHLLFVASLLICSSNSIEISDQIAKPYVVYMGNSSPNKIGLDEQIPESVHLELLSSIIPSEESERIELIHHYNHAFSGFSAMLTENEASALSGNDGVVSVFQDPVLQLHTTRSWDFLDSDLGMRPNSILKHQHSSSDDIIIGVIDTGIWPESPSFRDDGIRKIPSRWKGVCMEGHDFKKFNCNRKLIGARYYGKKDAKGSPRDFNGHGSHTASTAAGVIVTNTSYYGLAKGTARGGSPSARIAAYKACTEKGCFGGTLLKAIDDAIKDGVDIISISIGFSSEFLSEYLTDPIAIGAFHAEQRGIMVVCSAGNEGPDHYTVVNTAPWIFTVAASNIDRNFQSIVVLGNGKSFKGTGINFSNLTHSTMYSLVFGEEVAAKFTSKAEARNCYPGSLDNKKVAGKIVICVNDDQNITRNMKKLIVQDAGAMGMILIEKENIDVPFDAGLFPFTEVGNLQGYQILKYIKSTKKPTATILPTTEVPRYRPAPIVASFSSRGPASLTENILKPDVMAPGVSILAALVPKKENVPIGKKPSMFGLRSGTSMACPHVTGAAAFIKSVHRIWSPSMIKSALMTTAAPYNNMRKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETYVEDYIKFLCYFGYSNKDIRKMSKTKVTCPRTSKRLISNINYPSISIQKLKRKQKAKVITRTVTNVGTLNTTYIAKVHAPEGLIVKVIPNKLVFSKSVKRITYKVSFYAKEAHDGYNFGSLTWRDGRQYVHTVFAVQVE 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01512 763 PANTHER CUCUMISIN-LIKE 55 760 - -
Tsu08g01512 763 Pfam Peptidase inhibitor I9 34 116 IPR010259 -
Tsu08g01512 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 116 IPR037045 -
Tsu08g01512 763 Gene3D Peptidase S8/S53 domain 145 629 IPR036852 GO:0004252|GO:0006508
Tsu08g01512 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 760 IPR045051 -
Tsu08g01512 763 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Tsu08g01512 763 Gene3D - 343 487 - -
Tsu08g01512 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Tsu08g01512 763 Gene3D - 633 762 - -
Tsu08g01512 763 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Tsu08g01512 763 SUPERFAMILY Subtilisin-like 115 620 IPR036852 GO:0004252|GO:0006508
Tsu08g01512 763 CDD PA_subtilisin_like 350 480 - -
Tsu08g01512 763 Pfam Subtilase family 144 593 IPR000209 GO:0006508|GO:0008236
Tsu08g01512 763 CDD Peptidases_S8_3 113 582 IPR034197 -
Tsu08g01512 763 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Tsu08g01512 763 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Tsu08g01512 763 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01512 Tsu-Chr8 17647838 17654808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01512 34 760 Subtilisin-like Serine Gene Family AT1G20150 44.548 0.0 605