Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01496 ATGTCTAATGAATCACAAAGGGTTGTGGTGATCCACCATGCATCTAGAGACTTCAGTGCAAGAGCTCTTAAATATGCCATTAATGGCTTTTCACTTGAGCATGGTGATAGCCTTACACTCgtttcaattcttcatcatGTAAAGAGTCCAACTAGTGCCAAATTTCGGGCAATATTTGgtactgatcaaaatattgttgATGAAGAGGTtgccaagaagaaagaaaagatgtATAATAATGCATGTATCAAGAAAATTATTGAGAAGTGTCAAACACACAAGATTCAGTTCATGATAGAAGTTCTTCCAGGCAAGTTACCGGAGCTTGCTATAGATGCTGCGATCCGTTTGAAGGCAACATCAGTTATACTTGATAGAGACATGAAGAAATATAAGAAGGATTTCATGCAGAATATCTCTTGTGCTTTGCTTATAATGAAACGTGATCACTCCATTAAGCACTTGAAAGGGCCATCGAAAACAATGATTTCTTTTAGAGGATATGACAAtgaaagttttgaaaaatCAGGTTCTGAATCCTCACCAAGTTTATGGAGCATGACAAACGCTGTTTTCCGCTCAAAATCGAGCTGTAATCTTACAAAGATAGTTTGTAATCAACTTTATTGTCAAATtaaacaaactcctgaagataGAGATCTAGATATGGCAAGAGGTTATTGCCTATTACCTAGTGCTTCTGAAATGTATCACAATGAGACAAAAGTTGGACATATTAGTAACCATGAATCATATCATATAgttgaaaaattcaaaaattctgTTTGCTCAGTGTGTGAGAACAGAAGGCCAAAATTTGAATTGATGAAAGAATATACATATGTCGAGCTGCACGAAGCAACGCATGGTTTTTCGCCAAAGAACTATTTATCGGAAGGTGGATTTGGTTCTGTTTATTGGGGAAAGCTACACGGACTAAAGATTGCGGTTAAGAAACATAAGTTTGAAAGTCTTCAAGGCGAGAAAGAATTCAAATCTGAAGTTAATGCACTGAGCAAAGCGATACATGAAAATGTGGTCATGCTGTTAGGATCTTGTTCCGAGGGAAATAACAGATTTCTTGTATATGAATTTGTTTGCGATGGCTCACTTGATCAGCATTTATCGCAACATTCTAGAAAACCTCTTAATTGGCCAGCTAGGATCAAAGTGGCTATTGGAGCTGCAAAAGGCTTGTTTTATTTGCATAAGAATAATATAATACACAGAGATGTTAGACCAAGTAACATCCTTGTTACACATGATTATGAAGCAATGCTGGGAGATTTTGGACTGGCTAGAACTGAACAAATGGACTCAGTGTACTCAACAGATGTTGTTGGAACATTAGGGTATATGGCACCAGAATATGCAGAATCTGGTAAAGTGTCAACCAAGTCAGATGTGTATTCTTTTGGAGTAGTGCTTCTTCAGTTAATAACAGGAATGAGGACAACAGACAAAAGGATTGGAAACAAAAGTCTTGTGGGATGGGCTAGGCCACTATTGAAGGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACCTATGATTGTCATCAGCTTTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCACCAGGGATCCTCAGAAGCGATTATCAATGGATACAGTGGTTAGTGCATTAACTCATATAGTAGAAGGCAACACATGTAGCATGGTACTAAGAGACTGTTCACCAGCAAGGTCAGATTCATCCTATGACATGTCAGAATCTCTTTTATCAGAAGATGTCTCTCCAGGATtagatgattatgatgatgatgaagatggaaTCGTCTGTGTAGGATGTAACGCAATTAATTTACGACCCCCACCATCTCCTCCTTTAGGAAGCACTTCATGGAGTACAACAAGGCACAAGTATGTATATTCACAAGGCTGA 1917 0.3552 MSNESQRVVVIHHASRDFSARALKYAINGFSLEHGDSLTLVSILHHVKSPTSAKFRAIFGTDQNIVDEEVAKKKEKMYNNACIKKIIEKCQTHKIQFMIEVLPGKLPELAIDAAIRLKATSVILDRDMKKYKKDFMQNISCALLIMKRDHSIKHLKGPSKTMISFRGYDNESFEKSGSESSPSLWSMTNAVFRSKSSCNLTKIVCNQLYCQIKQTPEDRDLDMARGYCLLPSASEMYHNETKVGHISNHESYHIVEKFKNSVCSVCENRRPKFELMKEYTYVELHEATHGFSPKNYLSEGGFGSVYWGKLHGLKIAVKKHKFESLQGEKEFKSEVNALSKAIHENVVMLLGSCSEGNNRFLVYEFVCDGSLDQHLSQHSRKPLNWPARIKVAIGAAKGLFYLHKNNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKRIGNKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPQKRLSMDTVVSALTHIVEGNTCSMVLRDCSPARSDSSYDMSESLLSEDVSPGLDDYDDDEDGIVCVGCNAINLRPPPSPPLGSTSWSTTRHKYVYSQG 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01496 638 SMART tyrkin_6 291 553 IPR020635 GO:0004713|GO:0006468
Tsu08g01496 638 Gene3D Phosphorylase Kinase; domain 1 263 365 - -
Tsu08g01496 638 SUPERFAMILY Protein kinase-like (PK-like) 276 566 IPR011009 -
Tsu08g01496 638 PANTHER OS01G0253100 PROTEIN 7 618 IPR045271 GO:0004714|GO:0006468
Tsu08g01496 638 Gene3D Transferase(Phosphotransferase) domain 1 367 569 - -
Tsu08g01496 638 ProSiteProfiles Protein kinase domain profile. 291 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g01496 638 ProSitePatterns Tyrosine protein kinases specific active-site signature. 407 419 IPR008266 GO:0004672|GO:0006468
Tsu08g01496 638 Pfam Protein tyrosine and serine/threonine kinase 295 553 IPR001245 GO:0004672|GO:0006468
Tsu08g01496 638 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01496 Tsu-Chr8 17309137 17314549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01496 279 599 Trihelix Transcription Factor Family AT5G38560 41.317 1.69e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tsu08g01496 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00181 03 1470173 1472040 Tsu08g01496 08 17309137 17314549 PCT