Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01474 ATGGCGTCCACACCTCCTTCTTTCTCTCCTTCTCGTACCACATGTGCTTCTCTCCTCCGTCAGTTGCAGatGATATGGGATGAGATTGGGGAGAGTGACACTGATAGAGACAATATGCTTCTTCAACTGGAGCAAGAGTGTCTTGACATTTATCACAAAAAGGTTGAGGAAACCAGAAAGCACAAAGCTGATTTGGTTAAGTGGTTGGCTGATGCTGAATCTGAAGTCACCAATGTTGCTTCTTCTCTTGGTGATTGTGTGATGTTCTCACGGGGAAAGGGCACTCTGAAGCAGCAATTAGCCAACACCAGACCTGTTTTAGAGGAGTTGAGGTCGAAGAAGGATGAGAGAGTCAaggaatttttaaaaataaagtccCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTATGGACAATCCAAAGGTATCACTGATCAAGATGTTGATCAATGTGATCTGACAACGAAGAAATTGGGGGAACTTAAATCGCACCTCGATGAACTTCAAAACGAAAAGATGTTGCGCCAGCAGAAAGTGAAGAGTCATATCAGTACTATTAGCGAGCTTTCAGAAGTAATGTCAATTGATTTTTCGAAGACATTAAATGACATCCACCCAAGCTTGAGTGATTCATCAAATGGTGCATTGCTAAGCATTAGCAACGACACTCTTGCTAGCTTAACTGGGGCAATTCATTCATTAAAGCAGGAAAAGCAACAAAGGCTACAAAAGATACAAGAGCTTGCTAAATTCTTGGTAGAGTTATGGGATCTTATGGAGATGCCAATTGATGAGCAAAAGGCCTTTAGCCATGTTACCAGATTAATTTCAGCATCAGTTGATGAAGTGTCAATCCGAGGGTGCCTTTCTGCTGATGTCATCAAGCAGGTTGAGGTTGAAGTTCAACGCTTAAATATTTTGAAAGCTAGTAAGATGAAGGAAATAGTGTTTAAAAGGCAGAATGAACTTGAAGAAATTTACAGAGGAGTTCACATGGATGTGGATAGTGAATCTGCTAGACAGATTCTGACCAGCCTCATAGAATCTGGTAATATTGATATGTCTGAATTGCTTCAAAATATGGATGATCAAATCAGAAAGGCCAAAGAGCATGCTTTAAGCAGAAGAGATATCTTAGATAGGGTGGAGAAATGGAAATTTGCTGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATAGTGCAGTAAGAGGAGCACACAAAAATTTGAAGCGTGCAGAGAAAGCACGGATTCTTGTCAGCAAGATTCAATCTATGGTAGAGAATTTGACTGCAAAAGTGAAAGCATGGGAGGTGGAAAAAGAAATACCTTTCTTATATGAAAAGGTTCCATTGTTGCAAAGCTTGGATGAATACAATGTACAACGGCaattgagagaagaagagaagcgAAAATCTCGGGAGCAGAAGCGGCTTAATGAACAACTTGCTGTAGAGCAAGAAACAATGTTTGGTTCAAGATCTGCAACAAAGAAGCCTCTGAGCCAGAGCACTCATACTAACACCACAGTTGGGACACCGACTGGGCGCCGAATGCACACACCTTCAGGCCGTTACGGAACCTCAGGTGCGAAGGATCGCAGAGAAAGTGGCAGAGGGAACATAATTCCAGTGAACTATGTTGCTCTTCCGAAAGATGATTCTGTTTCAAGGGGAAATTAA 1701 0.4056 MASTPPSFSPSRTTCASLLRQLQMIWDEIGESDTDRDNMLLQLEQECLDIYHKKVEETRKHKADLVKWLADAESEVTNVASSLGDCVMFSRGKGTLKQQLANTRPVLEELRSKKDERVKEFLKIKSQISQICAEIAGYGQSKGITDQDVDQCDLTTKKLGELKSHLDELQNEKMLRQQKVKSHISTISELSEVMSIDFSKTLNDIHPSLSDSSNGALLSISNDTLASLTGAIHSLKQEKQQRLQKIQELAKFLVELWDLMEMPIDEQKAFSHVTRLISASVDEVSIRGCLSADVIKQVEVEVQRLNILKASKMKEIVFKRQNELEEIYRGVHMDVDSESARQILTSLIESGNIDMSELLQNMDDQIRKAKEHALSRRDILDRVEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKIQSMVENLTAKVKAWEVEKEIPFLYEKVPLLQSLDEYNVQRQLREEEKRKSREQKRLNEQLAVEQETMFGSRSATKKPLSQSTHTNTTVGTPTGRRMHTPSGRYGTSGAKDRRESGRGNIIPVNYVALPKDDSVSRGN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01474 566 Coils Coil 236 256 - -
Tsu08g01474 566 MobiDBLite consensus disorder prediction 495 550 - -
Tsu08g01474 566 Gene3D - 366 499 - -
Tsu08g01474 566 Coils Coil 426 446 - -
Tsu08g01474 566 Coils Coil 152 179 - -
Tsu08g01474 566 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 507 - -
Tsu08g01474 566 MobiDBLite consensus disorder prediction 495 523 - -
Tsu08g01474 566 Coils Coil 462 492 - -
Tsu08g01474 566 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 561 IPR007145 GO:0000226|GO:0008017
Tsu08g01474 566 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01474 Tsu-Chr8 17014829 17022674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01474 13 533 EF-hand Containing Proteins AT5G62250 36.514 3.19e-95 299