Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01471 atggGTAAAGTAGAAGTTTTTGTCAATAACAAAGAAAGTGTTGTTACACAAATTCCTTTAGATAACAAAATTAGTGTTGTAGAAAATGAtgtaattgataaaaaatattatttagatTGTCTTCCAGATGAAGCAAAAGTGATATTGAAGTCATTGGCAAGTAAATGGAAAAATGTATTGGATCCAAATGCATTGGAAGTTATTCCTCTTAAAGGGGCAATGACCAATGAGGTATTCCAAATAAAATGGCAAACAATAGAAGGGGAAATGTCAAGAAAGGTTCTTGTTAGAATCTATGGCGAAGGTACTAACATTTTCTTTGATAGGGCTAATGAGATTAGAACGTTCGAATTCATCTCAAAGAATGGTCAGGGTCCTCGTTTGTTAGGAAGGTTTGCTCAAGGTCGCGTTGAAGAGTTCATCCGTGCAAGGACATTATCAGCACCTGATTTGCGCGATCCAACTATTTCTGCTCTTATAGCCTCCAAAATGAAAGAGTTCCATGATCTTGAAATGCCTGGTTCAAAGAATGTGTACCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCGAGGCGCTTGTCATCTCCCGAAGAAGTTGAGACATTTCGTTTGGACATAATGGACAAAGAAATATCTCTTCTAGAAAAGGAATTGTCAGTATCTCTTAAACGCATAGGGTTTTGCCACAACGATTTACAATACGGTAACATCATGCTTGATGAAGTTACCAATTCTGTGACCGTAATTGATTATGAGTATGCAAGTTATAATCCTATCGCATATGATATAGCAAACCACTTCACTGAGATGGCAGCCAACTATCATACCGAAACTCCGCATGTTCTTGACTTCAGCAAATATCCAGATTTGAAGGAACGTCAAAGATTTGTGCAGACGTATTTGAGTTCATCAGGAGAACAAGTTAGTGATAGTGAAGTTCAACAACTACTAGATGAAGTTGAAAAGTATACACTTGCAAGTCATCTATTATGGGGACTTTGGGGAATAGTTTCAGGACatgtaaataaaattgattttgactacaaGGAGTATGCAAAACAGAGGTTTCAAGAGTACTGGTCAAGGAAAAGTAATCTTTTGAGCCCTCATGGATCTTCCATTGATAATGTTATTGCTGggaaaaaaaataatgttgcaGGGCCAAAAACATTGGCATCATTTCTCAGTAATAAATCAACAAAGAGCCCTCGAAGCCCTCGAATCTCCAGgaagttgaagaaattttttagtcTTCGTTTATTCAAATCAATACACTAG 1281 0.3513 MGKVEVFVNNKESVVTQIPLDNKISVVENDVIDKKYYLDCLPDEAKVILKSLASKWKNVLDPNALEVIPLKGAMTNEVFQIKWQTIEGEMSRKVLVRIYGEGTNIFFDRANEIRTFEFISKNGQGPRLLGRFAQGRVEEFIRARTLSAPDLRDPTISALIASKMKEFHDLEMPGSKNVYLWDRLRNWLSEARRLSSPEEVETFRLDIMDKEISLLEKELSVSLKRIGFCHNDLQYGNIMLDEVTNSVTVIDYEYASYNPIAYDIANHFTEMAANYHTETPHVLDFSKYPDLKERQRFVQTYLSSSGEQVSDSEVQQLLDEVEKYTLASHLLWGLWGIVSGHVNKIDFDYKEYAKQRFQEYWSRKSNLLSPHGSSIDNVIAGKKNNVAGPKTLASFLSNKSTKSPRSPRISRKLKKFFSLRLFKSIH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01471 426 Gene3D Phosphorylase Kinase; domain 1 52 140 - -
Tsu08g01471 426 SUPERFAMILY Protein kinase-like (PK-like) 32 366 IPR011009 -
Tsu08g01471 426 Gene3D - 100 361 - -
Tsu08g01471 426 PANTHER CHOLINE/ETHANOLAMINE KINASE 6 384 - -
Tsu08g01471 426 Pfam Choline/ethanolamine kinase 92 292 - -
Tsu08g01471 426 PANTHER CHOLINE/ETHANOALAMINE KINASE 6 384 - -
Tsu08g01471 426 CDD ETNK_euk 65 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01471 Tsu-Chr8 16976643 16980439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01471 27 369 Acyl Lipid Metabolism Gene Families AT1G74320 66.181 3.27e-176 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00231 03 1875363 1879611 Tsu08g01471 08 16976643 16980439 PCT