Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01464 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGTAAATGTCAACCAGAATGTGCATTTGCTCCTTATTTTCCACCTGATCAGCCACAAAAATTTGCAAATGTTCATAGAATTTTTGGAGCAAGTAATGTTACAAAACTTCTTAATGATTTACATCCTCACCAACGTGAAGATGCAGTTAATTCACTTGCTTATGAAGCCGAAATGAGACTTCGCGATCCGGTTTATGGTTGTGTAGGTGTAATTTCACTCCTTCAACATCAACTTCGTCAACTTCAAATGGATCTTTATTGTGCAAAATCCGAACTTTCGAGGTACCAAAACTTGAGTCTCGCAGCTACTGCTGGTCATGGACTCATAACCGGCTTGACAGGTGAATCTGTCACAGCCGTGAATAATTACCACCACACGCAGAACGTAGGTGGTGGTAATAATAACGGTAACGGCCGTGACCGTGaccatcattatcatcatcaattttttcCAAGGGATCAACATCAACATAATTTGGTTAGAAATTTTGATGCTGGAATTGGAAACAACTATGATGCTAGTCTCTTGGCTATGAATATATCTGCCAGCTTAGGTCAGATCAATCAGCTTCAACACCATAGTGCTGCCGGTGGTGGTGGTGACGACCGCCGTACTATTAACCGCTCCTAG 675 0.4089 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSLAATAGHGLITGLTGESVTAVNNYHHTQNVGGGNNNGNGRDRDHHYHHQFFPRDQHQHNLVRNFDAGIGNNYDASLLAMNISASLGQINQLQHHSAAGGGGDDRRTINRS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01464 224 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Tsu08g01464 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 182 - -
Tsu08g01464 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 182 - -
Tsu08g01464 224 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01464 Tsu-Chr8 16918274 16919065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01464 2 224 AS2 family AT1G65620 61.435 2.52e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu08g01464 LOB 3.3e-42 No_clan