Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01410 ATGGGGCCACTGAGGTCTGCTATTAAAGAAGCATGTGAGAAAACATTCTCAGTTGTAAAGTTCTTATGTGTTTTACATGTTACAAAAAACTACCTGGTTGACCCTGTTATGACTTATGGTCCTAGCATGCTTCCTGCAATTGATTTGGCACCAAACATCTTTCTTGCTGAAAAGATCTCAACTCGATTTGGTAAAGTTGCTCATGGAGATATTGTAGTTCATCGCTCACCTCAAAACCCTAGCAAGATATTCACGAAGCGCTTGGTTGGATTAGAGGGTGATAGCATTACATATGTTTCTGATCCCGATAACGGTGATACGCATGAAACAGTTGTGGTTCCAAAGGGTCACGTTTGGGTACAGGGCGATAACAAATATAATAGCAATGATTCTAGAAATTTTGGTCCAATTCCTTATGGCCTTATTGAGAGCAAGATATTCTGGAGGGTATGGCCACTTAAAGGTTTTGGATCGTTCTCGGAAAAATGA 489 0.4029 MGPLRSAIKEACEKTFSVVKFLCVLHVTKNYLVDPVMTYGPSMLPAIDLAPNIFLAEKISTRFGKVAHGDIVVHRSPQNPSKIFTKRLVGLEGDSITYVSDPDNGDTHETVVVPKGHVWVQGDNKYNSNDSRNFGPIPYGLIESKIFWRVWPLKGFGSFSEK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01410 162 TIGRFAM sigpep_I_bact: signal peptidase I 18 99 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g01410 162 ProSitePatterns Signal peptidases I signature 3. 118 131 IPR019758 GO:0004252|GO:0016021
Tsu08g01410 162 Pfam Signal peptidase, peptidase S26 17 99 IPR019533 GO:0004252|GO:0006465
Tsu08g01410 162 Pfam Signal peptidase, peptidase S26 109 151 IPR019533 GO:0004252|GO:0006465
Tsu08g01410 162 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 3 161 - -
Tsu08g01410 162 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 3 161 - -
Tsu08g01410 162 CDD S26_SPase_I 35 146 IPR019533 GO:0004252|GO:0006465
Tsu08g01410 162 SUPERFAMILY LexA/Signal peptidase 31 159 IPR036286 -
Tsu08g01410 162 Gene3D Umud Fragment, subunit A 28 158 - -
Tsu08g01410 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 31 47 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g01410 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 84 96 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g01410 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 132 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01410 Tsu-Chr8 16403481 16406638 Wgd