Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01395 ATGAAAATCCCAATTTTTCTAACACCTTTACTTCTCTGCCTCTTCATCTCCTTAGTCCAAGGACAAACCTCAAAATGTGACATACAAGATCATGGTTCAACCCTCAAAGTATTCCATATCTTTAGCCAATGTTCACCATTCAAACCATCAAAACCAATGTCATGGGAAGAAAGTGTCCTACAATTACAAGCTAAGGACCAAGCTAGAATGCAATATTTGTCTAACTTAGTTGCTAGAAAATCAGTTGTACCAATAGCCTCAGCTAGACAAATTATACAAAGTCCTACATATATTGTTAAGGCTAAAATTggaactccacctcaaactttGCTTTTAGCTTTGGATACTAGTAATGATGCTGCTTGGATTCCTTGTACTGGTTGTCTTGGTTGTTCAACTTCAAAACCTTTTGCTCCTATTAAATCTACAAGTTTTAAGAATGTTGGATGTGGTTCTTCTCAGTGTAAACAGGTACCAAACCCCAGTTGCGGTGGAAGCGCGTGTGCCTTCAACTTCACTTATGGAAGTTCATCAGTGGCAGCAAGTGTTGTCCAAGACACACTTACCTTAGCTACTGACCCAATTCCATCCTACACTTTTGGTTGTGTTCAAAAACAAACTGGGCCTTCAGCACCTCAACAAGGTTTATTGGGCTTGGGCCGAGGCCCATTGTCGCTCTTGGCCCAAACCCAAAATCTTTACAAATCAACTTTCTCTTACTGTTTGCCCAGCTTTAAATCATCCAACTTTAGTGGGTCATTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATTAAGTATACACCACTTCTCAGAAACCCTAGAAGATCATCGCTCTATTATGTTAACTTGGTTGCTATTAAAGTTGGTCGGAAAATCGTCGATATCCCTCCAGCGGCATTGGCCTTCAACCCAACCACCGGTGCTGGAACCATTTTCGATTCTGGTACGGTATTCACTCGGCTAGTTGCACCAGCATATACTGCTGTAAGAAATGAATTTCGTCGACGAGTAGGTCCAAAACTCGTTGTGACAACCCTAGGTGGGTTCGACACATGCTACAATGTCCCAATAGTTGTTCCTAATATAACGTTCATGTTCTCGGGTATGAATGTAACACTACCACCGGACAACATCCTCATACATAGCACCGCTGGCAGCACCACATGTTTGGCCATGGCGGCAGCTCCAGACAATGTGAACTCGGTGTTGAACGTGATAGCCAACATGCAACAACAAAACCACCGTGTTTTATTCGATGTGCCCAACTCAAGACTTGGTGTTGCTCGTGAACCTTGCACCTAA 1305 0.4245 MKIPIFLTPLLLCLFISLVQGQTSKCDIQDHGSTLKVFHIFSQCSPFKPSKPMSWEESVLQLQAKDQARMQYLSNLVARKSVVPIASARQIIQSPTYIVKAKIGTPPQTLLLALDTSNDAAWIPCTGCLGCSTSKPFAPIKSTSFKNVGCGSSQCKQVPNPSCGGSACAFNFTYGSSSVAASVVQDTLTLATDPIPSYTFGCVQKQTGPSAPQQGLLGLGRGPLSLLAQTQNLYKSTFSYCLPSFKSSNFSGSLRLGPVAQPKRIKYTPLLRNPRRSSLYYVNLVAIKVGRKIVDIPPAALAFNPTTGAGTIFDSGTVFTRLVAPAYTAVRNEFRRRVGPKLVVTTLGGFDTCYNVPIVVPNITFMFSGMNVTLPPDNILIHSTAGSTTCLAMAAAPDNVNSVLNVIANMQQQNHRVLFDVPNSRLGVAREPCT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01395 434 PANTHER ASPARTYL PROTEASE AED3-LIKE 11 434 - -
Tsu08g01395 434 Pfam Xylanase inhibitor N-terminal 97 257 IPR032861 -
Tsu08g01395 434 Gene3D Acid Proteases 258 434 IPR021109 -
Tsu08g01395 434 Pfam Xylanase inhibitor C-terminal 280 427 IPR032799 -
Tsu08g01395 434 SUPERFAMILY Acid proteases 95 433 IPR021109 -
Tsu08g01395 434 PANTHER ASPARTYL PROTEASES 11 434 IPR001461 GO:0004190|GO:0006508
Tsu08g01395 434 Gene3D Acid Proteases 73 257 IPR021109 -
Tsu08g01395 434 ProSiteProfiles Peptidase family A1 domain profile. 97 429 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01395 Tsu-Chr8 16282555 16286742 Dispersed/Wgd