Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01380 ATGGTTTCTCCttcgtcttcttcttcctcttctttggTTGGTCCACTACTCCTTGCTCCTAACAATGGTTATAAGGTTTGGGAAGACCCATCTTTCATCAAATGGAGGAAAAGGGACCCACATGTTCATTTACAATGCCATGAATCTGTTCAAGGATCTCTTAAATATTGGTATCAAAGAAGCAAAGTAGATTTTCTGGTTTCTGAATCTGCTGTTTGGAAAGATGATGGTGTTAATGGAGCTCTTGCTAGTGCTGCTTTTTGGGTTAAAGACTTGCCTTTTGTTAAATCATTGTCTGGATATTGGAAATTTTTCTTGGCTCCTAATCCTAGTAATGTCCCTACTAAATTTCATGAAAGTGATTTCCAGGATTCAGAATGGAGTACTTTACCTGTTCCTTCGAATTGGCAGCTGCATGGATTTGACTGTCCTATATATACAAATGTAACATATCCATTTCCACTCGATCCTCCTTTCGTTCCTACGGAAAATCCTACTGGCTGCTACAGAGTGGACTTCCATCTTCCTAAAGAGTGGGAAGGTAGAAGAATCTTGTTGCATTTTGAAGCAGTTGATTCAGCCTTTTGTGCATGGATAAACGGGCATCCTGTAGGATATAGTCAAGACAGCAGGCTACCTGCAGAGTTTGAAATCACTGATTTTTGTCATCCATGTGGTTCAAACCTGAAGAATGTTCTGGCCGTTCAAGTGTTTAGATGGAGTGATGGATGCTACCTTGAGGATCAGGATCATTGGCGATTATCTGGCATCCACCGTGATGTTATTCTTCTAGCAAAGCCGGAGGTATTTATCACTGACTATTTCTTCAAATCAAATCTTGCTGAAGATTTTTCTTACGCAGAGATGCTGGTTGAAGTAAAAATAGATAGATTACAAGATACGTCAATTGATAATGTTCTTACAAACTACACCATAGAAGCTACGCTATTTGATTCTGGAAGCTGGGAATCTCCTGATGGAAATCCTGATCTCCTTGCATCTAAAGTAGCAGACATAACATTCCAACCAACAACTGCACCGTTAGGGTTTTATGGTTATACGCTAGTGGGAAAATTACAATCACCAAAGCTTTGGTCAGCAGAACAGCCATACCTCTATACATTAGTTGTCGTCCTCAAAGATCAATCTGGCCGTGTTCTTGACTGTGAATCTTGTCAAGTAGGGTTTAAAAATGTATCTAAAGCCCACAAACAACTGCTTGTTAATGGACATCCCGTTGTAATAAGAGGTGTGAACAGGCATGAACATCATCCTGAAGTTGGAAAAGCAAACATAGAATCCTGCATGATCAAGGACTTGGTCTTAATGAAGCAAAACAATATTAATGCCGTGAGGAACAGCCATTACCCTCAGCATCCACGTTGGTATGAGCTATGCGATTTGTTTGGCATGTACATGATAGATGAAGCCAATATTGAGACACACGGGTTTGATTATTCTAAACATCTCAAGCATCCTACTTTGGAACCAATATGGGCAACTGCAATGTTGGACCGTGTGATTGGCATGGTTGAGAGGGATAAAAATCACACGTGCATTATTTCCTGGTCTTTAGGCAATGAATCTGGATTCGGAACAAATCATTTTGCTATGGCTGGTTGGATTCGAGGAAGAGATTCTTCGCGGGTGATACATTATGAAGGAGGTGGATCAAGAACTCCATGCACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCCAATGATCCTACCGAAACACGTCCTCTGATACTGTGCGAGTATTCACATGCTATGGGAAATAGCAATGGTAATCTACATATATATTGGGAAGCAATTGACAATACATTTGGACTCCAAGGAGGCTTTATATGGGATTGGGTAGATCAGGCTCTGTTGAAGGTTGATGCAGACGGTACAAAACGTTGGGCATATGGTGGTGAATTTGGAGATATTCCTAATGActtgaatttttgtttgaaCGGTCTTACGTTTCCTGATCGAACTGCTCATCCCGTTTTACATGaaGTCAAGTTCTTATACCAACCAATCAAAGTGAATTTAAACGAAGGGAAATTAGAGataaaaaatactcatttttttcaaacaacagAAGGGTTAGAGTTCAGCTGGTATATTTCTGCCGATGGATACAACCTTGGATCTGGTAAGTTGAGTCTTCCCTCAATAAAGCCTCAGAGCAGCTATGCCATCGAGTGGCAATCAGGTCCATGGTATTCTCTTTGGAATTCATCGTCATCAGAAGAAATCTTCTTGACGATAACCGCTAAGCTTTTAAACTCTACGCGCTGGGTTGAAGCCGGTCATATTGTTTCTACTGCTCAAGTTCAATTACCTGCTAGGAGAGACATTGTTCCTCATGTTATCAATATTGGTGGTGGCACTCCGGTTGTTGAAACACTTGGAGATATAATCAAAGTCAGTCAGCAAGATGTTTGGGACATAGCATTGAACACTGAAACAGGTTTAATTGAAAGCTGGAAGGTAAAAGGAGTACATGTTCTGAATAAGGGCATACATCCGTGTTTCTGGCGAGCTTCTATTGACAATGATAAAGGAGGAGGATCTGATAGTTACTTGTCGAAGTGGAAAGCTGCTGGAATTGATAGTGTCAACTTTATTGCTGAGAGCTGTTCTGTACAGAATACGACAGAAAACGCAGTTAAAATCTTGGTGGTTTTCCATGGTGTTACCAAGGGCGAGGATGGTTCTCTCCCTAACCAAGGCAAATCAAAGCTTCTGTTTACAACAGACATGACATATACTATTTATGCTTCCGGGGATGTGATTTTGGAATGCAGTGTGAAACCAAATGCTGATCTTCCTCCCTTGCCGCGTGTGGGAATCGCGATGAACTTGGAAAAATCGTTGGATCAAGTAAGTTGGTATGGAAGAGGGCCATTTGAATGTTATCCAGATAGAAAGGCTGCTGCTCAGGTCGCGATCTATGAGAAGAATGTGGATGAGTTGCATGTTCCTTATATTTTTCCCGGTGAATGTGGTGGTCGGGCAGATGTTAGATGGGCAACATTCTTAAACAAAAATGGTTTTGGAATATATGCTTCAAAGTATGGTAGCTCTCCATCCATGCAAATGAGTGCAAGCTATTATAGCACTTCGGAACTTGATCGGGCCACACACAATTATGAGCTCGTTAAAGGAGATAGCATTGAGATTCATCTAGACCACAAGCACATGGGCGTAGGTGGAGACGATAGTTGGTCTCCATGTGTCCATGATCAATATTTGGTTCCCCCGGTTCCATACTCCTTCTCCATCAGGTTGTCTCCGGTAACACCAGCTACTTCCGGTCATGACATCTACAAATCTCAGCTTCAAAACTCTTTATTTCTTGAATCACATGACGTGATACTTAAAGATACATTATCCAGAAGAACACCAAAGACTAGCATGTTCATGAAGGATGTCAATAAAATTCAAAGTTGTTGA 3468 0.4034 MVSPSSSSSSSLVGPLLLAPNNGYKVWEDPSFIKWRKRDPHVHLQCHESVQGSLKYWYQRSKVDFLVSESAVWKDDGVNGALASAAFWVKDLPFVKSLSGYWKFFLAPNPSNVPTKFHESDFQDSEWSTLPVPSNWQLHGFDCPIYTNVTYPFPLDPPFVPTENPTGCYRVDFHLPKEWEGRRILLHFEAVDSAFCAWINGHPVGYSQDSRLPAEFEITDFCHPCGSNLKNVLAVQVFRWSDGCYLEDQDHWRLSGIHRDVILLAKPEVFITDYFFKSNLAEDFSYAEMLVEVKIDRLQDTSIDNVLTNYTIEATLFDSGSWESPDGNPDLLASKVADITFQPTTAPLGFYGYTLVGKLQSPKLWSAEQPYLYTLVVVLKDQSGRVLDCESCQVGFKNVSKAHKQLLVNGHPVVIRGVNRHEHHPEVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHPTLEPIWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFAMAGWIRGRDSSRVIHYEGGGSRTPCTDIVCPMYMRVWDMLKIANDPTETRPLILCEYSHAMGNSNGNLHIYWEAIDNTFGLQGGFIWDWVDQALLKVDADGTKRWAYGGEFGDIPNDLNFCLNGLTFPDRTAHPVLHEVKFLYQPIKVNLNEGKLEIKNTHFFQTTEGLEFSWYISADGYNLGSGKLSLPSIKPQSSYAIEWQSGPWYSLWNSSSSEEIFLTITAKLLNSTRWVEAGHIVSTAQVQLPARRDIVPHVINIGGGTPVVETLGDIIKVSQQDVWDIALNTETGLIESWKVKGVHVLNKGIHPCFWRASIDNDKGGGSDSYLSKWKAAGIDSVNFIAESCSVQNTTENAVKILVVFHGVTKGEDGSLPNQGKSKLLFTTDMTYTIYASGDVILECSVKPNADLPPLPRVGIAMNLEKSLDQVSWYGRGPFECYPDRKAAAQVAIYEKNVDELHVPYIFPGECGGRADVRWATFLNKNGFGIYASKYGSSPSMQMSASYYSTSELDRATHNYELVKGDSIEIHLDHKHMGVGGDDSWSPCVHDQYLVPPVPYSFSIRLSPVTPATSGHDIYKSQLQNSLFLESHDVILKDTLSRRTPKTSMFMKDVNKIQSC 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01380 1155 Pfam Glycosyl hydrolases family 2 269 397 IPR006102 GO:0004553|GO:0005975
Tsu08g01380 1155 Gene3D Immunoglobulins 681 789 IPR013783 -
Tsu08g01380 1155 Gene3D - 802 1102 IPR014718 GO:0030246
Tsu08g01380 1155 Pfam Glycosyl hydrolases family 2, TIM barrel domain 403 684 IPR006103 GO:0004553|GO:0005975
Tsu08g01380 1155 PRINTS Glycosyl hydrolase family 2 signature 514 529 IPR006101 GO:0004553|GO:0005975
Tsu08g01380 1155 PRINTS Glycosyl hydrolase family 2 signature 439 457 IPR006101 GO:0004553|GO:0005975
Tsu08g01380 1155 PRINTS Glycosyl hydrolase family 2 signature 191 206 IPR006101 GO:0004553|GO:0005975
Tsu08g01380 1155 PRINTS Glycosyl hydrolase family 2 signature 408 422 IPR006101 GO:0004553|GO:0005975
Tsu08g01380 1155 PRINTS Glycosyl hydrolase family 2 signature 587 602 IPR006101 GO:0004553|GO:0005975
Tsu08g01380 1155 SUPERFAMILY Galactose-binding domain-like 95 267 IPR008979 -
Tsu08g01380 1155 Pfam Glycosyl hydrolases family 2, sugar binding domain 96 267 IPR006104 GO:0004553|GO:0005975
Tsu08g01380 1155 SUPERFAMILY (Trans)glycosidases 402 681 IPR017853 -
Tsu08g01380 1155 SUPERFAMILY beta-Galactosidase/glucuronidase domain 677 787 IPR036156 -
Tsu08g01380 1155 PANTHER BETA-GALACTOSIDASE 14 1106 - -
Tsu08g01380 1155 SUPERFAMILY beta-Galactosidase/glucuronidase domain 269 396 IPR036156 -
Tsu08g01380 1155 Gene3D Glycosidases 399 679 - -
Tsu08g01380 1155 PANTHER GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN 14 1106 - -
Tsu08g01380 1155 SUPERFAMILY Galactose mutarotase-like 808 1104 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tsu08g01380 1155 Gene3D Immunoglobulins 268 397 IPR013783 -
Tsu08g01380 1155 SMART Bgal_small_N_2 812 1102 IPR004199 GO:0004565|GO:0005975|GO:0009341
Tsu08g01380 1155 Pfam Beta-galactosidase, domain 4 692 785 IPR032312 -
Tsu08g01380 1155 Pfam Beta galactosidase small chain 817 1101 IPR004199 GO:0004565|GO:0005975|GO:0009341
Tsu08g01380 1155 Gene3D - 19 267 - -
Tsu08g01380 1155 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 514 528 IPR023232 -
Tsu08g01380 1155 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 449 474 IPR023230 -