Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01374 ATGGCAGATAGCCCAAGTAAGAGCAAAAGCAATTCCCTCATCCATCATACCACAACCACAAAGGGTGGTTGGAATGCTGCAATCTTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTAGCATCAAATCTAGTAAACTACCTCACAAATTTTCTGAAAGAACCAACAACTACAGCTGTGAAAAACGTGAACACATGGGTTGGTGTTTCTTCACTGTTCCCTTTGCTTGGTGGTTTCATAGCTGATTCCTATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATTTTGtgGGCATGGTTTTCTTGACACTTTCAGTGTCAGCACTTAGACATAAAACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCACAAACCTTGTGTTCAAACTTTCGCCGCCGATCAATTCGACGACGACACGCCTGAAGAGAAGGATGCTAAGAGTTCATTTTTTAATTGGTGGTACTTAGGCATTGTTGCTGGTTCAACTGCTGCTGCGTTTATTCCAGTATATCTTCAGGACAATGTTGGGTGGGGAGTGGGGTTAGGAGTATTAGCAGGAGTCTTGGCAATGGCATTGGGACTTTTCTTATTGGGAATCAAAAAGTACAGAAAAGAAGGCCCTACGGGTAGCCCATTTACAAGACTGGCCCAAGTTTTTGTTGCCACATTTTACAAGTGGCGCGTGCAAGACACGCTCCTTCATAGTAACAACTTTTGCTATAGTGAAGAGGATAAAGTTGAGcctcaccatcatcatcatcttcatgttCAACCTAAATATCACACTTTGCTACATACTCGTCAATATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATGCCTCTAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACACAAGTTGAAGAAGTTAAGTTAGTTCTTCGTTTAATCCCTATATGGTTAAGTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGGACACACATATTTCACTAAACAAGGTGGCACATTAATCCGTACCATAGGACCGAAATTTCAATTCCCTCCGGCGTCACTTCAAGGCCTAGTCGGAATCACAATCCTTTTTGTCGTTCCGATATACGACCGAGTTTTTGTGCCGCTCGCTAGAAAATTTACCGGACACCCGAATGGGATAACCGTGTTGCAAAGAATTGGGGTCGGTCTATTTTTGTCTATACTTACAATGGCTGTTTCGGCTATCGTAGAAACCAAAAGGGTTAATGTTGCTAAAAATCACGGTCTAATAGACGATCCAAGTGCAATACTACCGATGTATATTTGGTGGTTACTTCCTCAATATATGATCACCGGCGTCTCCGATGCATTTACTATCGTTGGACTACAAGAATTGTTCTACGATCAAATGCCGGAGGGGTTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATTATAGTTGTTGTTGAGGAAATTAGTTCAAAAGCTGGTGAGAAATGGTTGGGAGATAATATCAATAGGGCACATCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATTTGGCTTGCAAAGTGTTATGAGTATAAAAAGGTTGATGTGGATGAAAGAAATAACCAAGAGGGTTCTAGCTTCAATAGATATCGTTCTGGAGTGTAA 1728 0.3976 MADSPSKSKSNSLIHHTTTTKGGWNAAIFIIFVEFAERFAYQGLASNLVNYLTNFLKEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYFVGMVFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAADQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAAFIPVYLQDNVGWGVGLGVLAGVLAMALGLFLLGIKKYRKEGPTGSPFTRLAQVFVATFYKWRVQDTLLHSNNFCYSEEDKVEPHHHHHLHVQPKYHTLLHTRQYRFLDKAAIIDEVDASNKTRNPWRLCSVTQVEEVKLVLRLIPIWLSCLMFTVVQAQGHTYFTKQGGTLIRTIGPKFQFPPASLQGLVGITILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMAVSAIVETKRVNVAKNHGLIDDPSAILPMYIWWLLPQYMITGVSDAFTIVGLQELFYDQMPEGLRSLGAAAYISIVGVGSFVSNIIIVVVEEISSKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYIWLAKCYEYKKVDVDERNNQEGSSFNRYRSGV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01374 575 Gene3D MFS general substrate transporter like domains 6 559 IPR036259 -
Tsu08g01374 575 Pfam POT family 92 511 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu08g01374 575 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 81 105 IPR018456 GO:0006857|GO:0016020|GO:0022857
Tsu08g01374 575 SUPERFAMILY MFS general substrate transporter 1 560 IPR036259 -
Tsu08g01374 575 PANTHER PROTEIN NRT1/ PTR FAMILY 5.4 15 556 - -
Tsu08g01374 575 CDD MFS_NPF5 24 552 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tsu08g01374 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 556 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01374 Tsu-Chr8 15893752 15901854 Dispersed/Wgd