Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01369 ATGGGTATGGCTAAAGAGAATCAATTCCATGTTTTGGCTGTTGATGATAGTATCATTGATAGAATGTTGATTGAGAGACTCCTCAAAACTTCTTCTTTTCAAGTTACTGCAGTGGATTCTGCTACTAAGGCTTTAAAATTTCTTGGTTTGGTTGAGGATGCTGCTTCAGAAATTCATCAGGAGGTAGATGTAAATCTGATCATAACAGATTATTGTATGCCAGGGATGACAGGCTATGATCTGCTTAGAAAAGTCAAGGAATCCAAATCTTTTAAAGACATACCGGTCGTGATAATGTCTTCAGAGAATGTTCCATCTAGAATAAACAGATGTTTGGAAGAGGGAGCTGAAGAATTCTTTTTGAAACCAGTTCAACAATCAGATGTAAACAAGTTGAAGCCTCATTTGCTGAAATCAAAAGTTAAGGAAGAGAAAGAACAACCTATTAACAACTAA 456 0.3596 MGMAKENQFHVLAVDDSIIDRMLIERLLKTSSFQVTAVDSATKALKFLGLVEDAASEIHQEVDVNLIITDYCMPGMTGYDLLRKVKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSKVKEEKEQPINN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01369 151 Gene3D - 10 150 - -
Tsu08g01369 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 147 IPR045279 GO:0009736
Tsu08g01369 151 SMART REC_2 9 136 IPR001789 GO:0000160
Tsu08g01369 151 ProSiteProfiles Response regulatory domain profile. 10 137 IPR001789 GO:0000160
Tsu08g01369 151 CDD REC_typeA_ARR 11 132 - -
Tsu08g01369 151 Pfam Response regulator receiver domain 11 129 IPR001789 GO:0000160
Tsu08g01369 151 PANTHER RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN 3 147 - -
Tsu08g01369 151 SUPERFAMILY CheY-like 8 132 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01369 Tsu-Chr8 15805505 15807106 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu08g01369 Response_reg 1.5e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01369 08 15805505 15807106 Tsu03g00466 03 3949235 3966281 PCT