Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01333 ATGGCATTTAATCAAGAATTAGAAGCTATAACCCAAGCTTTCTCAGGACATGGGGTGGACGAGAAATCATTGACAACAATATTGGGAAAATGGGATCCTTTGGAGAGAGAGTCTTATAGAAAGAagacatcaaatttcttcattgAAGATCATGAACGCCAATTTCAGAGGTGGAATGATCATTGTGTTCGTCTTCTCAAACATGAGTTTGTGCGTTTTAAGAATGCAGTGGTGCTTTGGAGCATGCACCCTTGGGAAAGAGATGCTCGTTTAGCAAAAGAGGCCCTAAAGAAAGGTCCAAGTTCATATGGTGTGTTGATTGAGATTGCATGCACAAGATCTTCAGAGGAGCTTTTGGGAGCTAGAAAGGCATATCATTCCCTCTTTGACCACTCCATTGAAGAAGATGTTGCTTctcacattcatggcattgatCGAAAGCTCTTGGTTGCACTTGTGAGTGCCTATAGGTATGAAGGACCAAAGGTGAAAGATGACACTGCAAAATCAGAAGCCAAAACACTTTCCAATGCCATTAAGAATGATGAAAAGAAGCCAATTGTAGAGGATGATGAAGTAATAAGGATTTTGGCTACAAGAAGCAAGCCACATCTTCAAGCAGTTTACAAGCACTATAAAGAGTTATCTGGCAAGAATCTTGAAGAGGATCTTAATGACTTAAGGTTTAAAGAGACTGTGCAATGCCTTTGTACTCCACAAGTGTATTTTAGTAAGGTTTTGGATGAAGCATTAAGAATTGATGTGGATAAGAATATTAAGAAATCACTTACTCGTGTGATTATTACTAGAGCTGACATTGATATGAAGGAGATAAAAGCTGAGTATAATAACTTATATGGAGTTTCTTTGCctcaaaaaattgaagagacTGCTAAAGGGAACTACAAAGATTTCTTGCTAACCTTAATTGCTAGAGGAGACTAA 945 0.3608 MAFNQELEAITQAFSGHGVDEKSLTTILGKWDPLERESYRKKTSNFFIEDHERQFQRWNDHCVRLLKHEFVRFKNAVVLWSMHPWERDARLAKEALKKGPSSYGVLIEIACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGIDRKLLVALVSAYRYEGPKVKDDTAKSEAKTLSNAIKNDEKKPIVEDDEVIRILATRSKPHLQAVYKHYKELSGKNLEEDLNDLRFKETVQCLCTPQVYFSKVLDEALRIDVDKNIKKSLTRVIITRADIDMKEIKAEYNNLYGVSLPQKIEETAKGNYKDFLLTLIARGD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01333 314 ProSiteProfiles Annexin repeat profile. 166 242 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 SUPERFAMILY Annexin 4 312 IPR037104 GO:0005509|GO:0005544
Tsu08g01333 314 Gene3D Annexin 239 311 IPR037104 GO:0005509|GO:0005544
Tsu08g01333 314 Gene3D Annexin 167 237 IPR037104 GO:0005509|GO:0005544
Tsu08g01333 314 PANTHER ANNEXIN D4 3 314 - -
Tsu08g01333 314 PANTHER ANNEXIN 3 314 - -
Tsu08g01333 314 Gene3D Annexin 83 153 IPR037104 GO:0005509|GO:0005544
Tsu08g01333 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Tsu08g01333 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Tsu08g01333 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Tsu08g01333 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Tsu08g01333 314 Pfam Annexin 176 225 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 Pfam Annexin 261 309 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 SMART annex3 188 236 IPR018502 GO:0005509|GO:0005544
Tsu08g01333 314 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01333 Tsu-Chr8 15263247 15267999 Dispersed/Tandem