Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01325 ATGGGTGCTGCTTGTTGTGTTGCATCCAGAGATAAAACTATTCAAAGTGGACCGACTAGTGAAATTGGGCATAGGAATGTTCGGTGTTCACCGACATGGAGCTTGCGGTGGGATCATAGAGGCCGTGTTGCCGGAGAAGATACTAGTATAAATTGGTTTTCTGATGGTGTTAGCAGCAATGGCAGACTGGAGAGTAAAAATGAATCGCAGGTATCTGAAGATGGAAGCCCGTTGCAGAATTATCAAAGGAATAGATGGCAAAAGTCCCCAATTTCTGAAGGAACTGCTAGACACATAAAATCATTTTCTGATCAATCTATTTCAAGGAATGTTTCCATGGCTGAGAGAATGGAACAGGTGAAGGAGTTAGAAGAATCATCAGCAGTATCATGTCCATTTCCTACAAAAACTTCACCCACATCCTCTTCTACTTCGGTGTCTATATCTCCTCTGCCACCCCAAAGCCGCCTACCTCCATCTAGCTCAACACCATTAAGGTGGCCCTCCCATTCCACAGGACATCAGTTATCACGACAAGTTTCTGATAGCCGAATCATGGGATTTAAGTCACCTTGCAACTTATATGTATCTGAAGAAAGGCCAGTGTTTCCCTCATGGAGCAATGAATATGGTATGCACTCTGGTGGTGGATCTTCAGATTATTGCTCTAGGCCTGGCTTTACTGAGCTGATGGGTAATTCTCacatggaaagatggtcatttGATAGTGAGTCATTTGGTTTTAATTGTGAAAAGTTGGCTCGGTTCAGTAGTCAGTTTTCAACTTCTCCGGTTGATTCGCAAACATGTGGTGTTTGCTCAAAACTTTTAGCTGAAAAGTTGTCTTGGAGCAGTCAAAAGATTATTGCAAATAATGACCTTTCTGTAGTTTCTGTTCTTATTTGTGGACATGTCTATCATGCGGAATGTTTAGAGAGTTTGACACCTGAAATCAACAAGTATGATCCAGCTTGCCCTGTTTGCACTTTTGGTGAAAAACAAACCCGTAAATTGTTTGAAAAAGCTTTGAAAGCTGAAATGGATTCAAAAgctataaataagaaatcaaggAATCAAATTGTGGATAATGATATTGATTATGACgatgatttttttgtatttgatcaGTTTAAAGATAAAAGGCGCCAAAATAAAGGTATTAGAATGGAGTCTAATTCTAGCAAGAGAAGCACTTCTGGGAAACCTTTTCTGAGTAAACACTTCTCATTTGGCTCAAAGGGTTCCAAATGCATGTTAGATAATCACCCAACCCGAAAGAAGGGCTTTTTTTGGGCAAAGTCTAGCAGGGAATAA 1314 0.3889 MGAACCVASRDKTIQSGPTSEIGHRNVRCSPTWSLRWDHRGRVAGEDTSINWFSDGVSSNGRLESKNESQVSEDGSPLQNYQRNRWQKSPISEGTARHIKSFSDQSISRNVSMAERMEQVKELEESSAVSCPFPTKTSPTSSSTSVSISPLPPQSRLPPSSSTPLRWPSHSTGHQLSRQVSDSRIMGFKSPCNLYVSEERPVFPSWSNEYGMHSGGGSSDYCSRPGFTELMGNSHMERWSFDSESFGFNCEKLARFSSQFSTSPVDSQTCGVCSKLLAEKLSWSSQKIIANNDLSVVSVLICGHVYHAECLESLTPEINKYDPACPVCTFGEKQTRKLFEKALKAEMDSKAINKKSRNQIVDNDIDYDDDFFVFDQFKDKRRQNKGIRMESNSSKRSTSGKPFLSKHFSFGSKGSKCMLDNHPTRKKGFFWAKSSRE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01325 437 MobiDBLite consensus disorder prediction 56 103 - -
Tsu08g01325 437 PANTHER EXPRESSED PROTEIN 1 431 - -
Tsu08g01325 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 330 IPR013083 -
Tsu08g01325 437 MobiDBLite consensus disorder prediction 130 151 - -
Tsu08g01325 437 PANTHER BNAA09G43140D PROTEIN 1 431 - -
Tsu08g01325 437 MobiDBLite consensus disorder prediction 160 180 - -
Tsu08g01325 437 MobiDBLite consensus disorder prediction 115 180 - -
Tsu08g01325 437 MobiDBLite consensus disorder prediction 390 404 - -
Tsu08g01325 437 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
Tsu08g01325 437 SUPERFAMILY RING/U-box 265 329 - -
Tsu08g01325 437 MobiDBLite consensus disorder prediction 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01325 Tsu-Chr8 15097653 15103705 Dispersed/Transposed