Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01323 ATggcttcttcatcttcttctgtTATCAAAGATGCAAAAGTTCTCATGGTTGGTGCTGGTGGAATTGGATGCGAGCTTCTCAAAACTCTCGCTCTCTCTGGTTTCTCTGATATACATATCATTGACATGGACACTATAGAAGTCAGTAACTTGAACAGACAATTTTTGTTTCGACAATCCCATGTTGGACAGTCTAAAGCTAAAGTTGCTAGGGATGCAGTTTTAAAATTTAGGCCCAAGATAAACATTACATCATATCATGCAAATGTCAAAGATCCTGATTTTAATGTTGACTTCTTTAAGCAATTTAATGTTGTTCTGAATGGCCTCGACAATCTTGATGCACGCCGACATGTGAATCGCTTGTGCTTGGCAGCTGATGTTCCTTTAGTTGAAAGCGGAACTACTGGGTTCCTTGGTCAgGTTACAGTGCATGTCAAGGGAAGGACAGAGTGCTATGAGTGTCAGCCTAAACCAGCCCCCAAGACGTATCCAGTCTGTACTATCACAAGCACTCCATCAAAGTTTGTTCACTGTATTGTGTGGGCAAAGGACCTACTATTTACCAAGTTATTTGGGGACAAGAATCAAGATAATGATTTAAATGTTCGCTCAAGTGATGCTGCCAGCTCATCAAAAAACGTAGATGATATATTTGAACATAGCAAAGATGAAGATATTGCTCAATATGGAAGGAAAATATTTGATCATGTATTTGGGTATAATATTGAATTAGCTTTGTCCAATGAGGAGACATGGAAAAATCGAAACAGACCTAAACCTATATACAGCAAGGATGTCCTGTCTGATGAATTGGCTAAACAAAATGGAAATCTGGACAATGATAATGCTTGTGGTGATGGATTGTCAGTTTCTGCCATGTCATCTCTGGGCATGAAGAACCCACAAGATGTATGGAGTCTCAGAGAAAATTCTAGAATACTTCTCGAAGCACTGAGACtatttttcacaaaaagagAAAAGGAGATTGGCAATCTGTGCTTTGATAAAGATGACCAGTTGGCTGTAGAATTTGTTACTGCAGCTGCAAACATACGAGCTGCTTCATTTGGCATACCTCTACACAGTCTTTTTGAAGCTAAAGGAATTGCTGGTAACATTGTGCATGCTGTGGCGACAACAAATGCTGTTATTGCTGGTTTGATTGTCATTGAAGCAATTAAGGTGCTGAAAAATGACATTAAAAGTTATAGAATGACATATTGTCTGGAACACCCATCAAGAAACCTGCTACTTATGCCAGTGGAGCCATTTGAACCTAACAAATCCTGTTATGTTTGTTCTGAGAGTCCTGTACTGCTCGAAATAAACACAAACTGTTCAAAGTTGAAGGATGTTGTCGAAAAGATCATCAAGGCTAAGCTTGGGATGAGCCTTCCACTTATTATGAATGCTTCAAACCTCCTCTATGAAGCTGGTGATATTGAAGAAGACATGGTTGCAATTTATGATGCCAACCTTGAAAAGGTCCTAGCTGAGCTTCCTTCTCCTGTAACCGGTGGTACAATGCTGACAGTAGAGGATTTTCAACAGGAACTGAAGTGCAATATTAACATAAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCTGATGGCATGGTTCTCTCAGGATGGACTCAACCGGTGTCAGCAGCAGAGGAATCTGTTAGTAACGGTGCAAACACCTCAGACACACCATTAACAGCTGTAGAATCTGAAAACGATGATGATATTGGTATAGTTTCTCCAGTGAAGAAAAGAAAGCTTCCTGATGATTCTGATCAGTCGAATACTGCTGATGACACAAGGCATCACAAGCAATTGCAAGTAATCGATGATGAAGACGATCTTGTTATGCTTGATGGGAATTTAGATGGGTTTAAAAAGAGAAGAGTGTCATAG 1905 0.39 MASSSSSVIKDAKVLMVGAGGIGCELLKTLALSGFSDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPKINITSYHANVKDPDFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFTKLFGDKNQDNDLNVRSSDAASSSKNVDDIFEHSKDEDIAQYGRKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELAKQNGNLDNDNACGDGLSVSAMSSLGMKNPQDVWSLRENSRILLEALRLFFTKREKEIGNLCFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLKNDIKSYRMTYCLEHPSRNLLLMPVEPFEPNKSCYVCSESPVLLEINTNCSKLKDVVEKIIKAKLGMSLPLIMNASNLLYEAGDIEEDMVAIYDANLEKVLAELPSPVTGGTMLTVEDFQQELKCNINIKHREEFDEEKEPDGMVLSGWTQPVSAAEESVSNGANTSDTPLTAVESENDDDIGIVSPVKKRKLPDDSDQSNTADDTRHHKQLQVIDDEDDLVMLDGNLDGFKKRRVS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01323 634 Pfam Ubiquitin-activating enzyme, SCCH domain 320 368 IPR019572 -
Tsu08g01323 634 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 5 554 IPR045886 -
Tsu08g01323 634 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 5 554 - -
Tsu08g01323 634 Gene3D - 435 622 - -
Tsu08g01323 634 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 9 483 IPR035985 GO:0008641
Tsu08g01323 634 MobiDBLite consensus disorder prediction 552 570 - -
Tsu08g01323 634 Gene3D - 1 107 IPR042449 -
Tsu08g01323 634 MobiDBLite consensus disorder prediction 579 611 - -
Tsu08g01323 634 PIRSF SUMO_E1B 1 615 IPR030661 GO:0016925|GO:0019948
Tsu08g01323 634 Pfam ThiF family 9 432 IPR000594 -
Tsu08g01323 634 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 441 532 IPR028077 -
Tsu08g01323 634 MobiDBLite consensus disorder prediction 552 611 - -
Tsu08g01323 634 CDD Uba2_SUMO 13 434 - -
Tsu08g01323 634 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 162 373 IPR023318 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01323 Tsu-Chr8 15078529 15085318 Dispersed/Wgd