Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01299 ATGGTTGATCAAGTTCAGCGCCCTAGACTCATCGAGAATGTTGCACGCCAGACCGGTCTTTCTATGTACCAAAGCAGGTCATTTGGAAATTACTCCAACCCTGCATTTCAGTATCCAATGATGCCGGCATGTAGATCAACAGCAACCGACTTTTCTACTATTGCAACAACAGCTTCCCCTATCTTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTTCTTGTCGACTTTCTCATGGGAGGAGTTTCAGCTGCTGTGTCTAAAACCGCTGCTGCTCCTATTGAACGAATTAAGCTTTTGATCCAGAACCAAGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGAATTGGTGACTGTTTTAAGCGAACAATGGCTGATGAAGGTGCTGTTTCTCTATGGAGAGGTAACACCGCAAATGTCATCCGTTATTTTCCCACACAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGACGGTTACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCTTCATCCCTTTTCTTTGTCTACTCCCTCGACTATGCTCGTACCCGTCTTGCAAATGATGCAAAGGCTGCAAAGAAGGGTGCAGGCGGAAGACAATTCGACGGTCTTGTTGATGTCTACAAGAAGACATTGGCGACTGATGGTATTGCTGGGCTTTACCGTGGTTTCAACATTTCATGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTCGGAATGTATGATTCCTTGAAGCCAGTTCTCCTAACTGGATCTTTGCAGGATAGTTTCTTCGCTAGTTTTGGACTTGGATGGCTCATCACCAACGGTGCAGGTCTAGCATCTTACCCAATTGACACTGTCAGAAGAAGAATGATGATGACATCTGGTGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCAACCAAATCCTCAAGAATGAGGGTGCTAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTCCGTGCTGTCGCTGGTGCTGGTGTGCTTGCTGGTTACGACAAGTTACAGGTCATAATGCTCGGCAAGAAGTACGGATCTGGTGGTgcttaa 1122 0.4554 MVDQVQRPRLIENVARQTGLSMYQSRSFGNYSNPAFQYPMMPACRSTATDFSTIATTASPIFVAAPAEKGNFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMADEGAVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGAGGRQFDGLVDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 241 259 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 285 307 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 88 102 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 138 158 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Mitochondrial carrier protein signature 75 88 IPR002067 GO:0055085
Tsu08g01299 373 PRINTS Adenine nucleotide translocator signature 72 84 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 PRINTS Adenine nucleotide translocator signature 116 137 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 PRINTS Adenine nucleotide translocator signature 149 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 PRINTS Adenine nucleotide translocator signature 175 188 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 PRINTS Adenine nucleotide translocator signature 281 297 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 Pfam Mitochondrial carrier protein 174 271 IPR018108 -
Tsu08g01299 373 Pfam Mitochondrial carrier protein 277 363 IPR018108 -
Tsu08g01299 373 Pfam Mitochondrial carrier protein 71 167 IPR018108 -
Tsu08g01299 373 Gene3D Mitochondrial carrier domain 73 369 IPR023395 -
Tsu08g01299 373 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 21 373 - -
Tsu08g01299 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 276 362 IPR018108 -
Tsu08g01299 373 SUPERFAMILY Mitochondrial carrier 70 358 IPR023395 -
Tsu08g01299 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 175 268 IPR018108 -
Tsu08g01299 373 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 21 373 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu08g01299 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 163 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01299 Tsu-Chr8 14743635 14747053 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00506 03 4325541 4328720 Tsu08g01299 08 14743635 14747053 ECH
Tsu08g01299 08 14743635 14747053 Tsu08g01299 08 14743635 14747053 ECH