Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01287 ATGAGTATTGTGTATCAAGCTCTTGATTACTCTGATGGTGGTTCAAGTAGAAACTCAGAAACACAACAACATTGTCACCAAAACAATTCTGGCTTATCGCGGTACGATTCAGCTCCAACCTCATTGCTTACAAGTCTTGTAGACACAAGCATTGGTAATTTTTTCAATGATGAAACTTTCACAAATgataatcatcatcaacaacatcaaaatcaacatTATTCTCCATCTACAAGTTCAGAAATGGAAACCATGTTGACAAATTCGGAATCTTTGTATGAATTCAGAGACAATAAAccaatgaaagaagaagaaaatgaccCTTTTTCACATGGATTACAATATAATGGTTACTCTTATGcatcacaaaatcaaataatttaccAACCTCAACAGAATCAAGGATTAGCAAATGGTTTTGATGGTTTATTTAGTGCAATGAGTTCCTTGGATTCTTCTAATAATTGCTCCAATCTCATTAGGCAAAAGAGTTCTCCTGCAGAGTTTTTCTCCAATTATTCAATTAATAATGGCTTTGCTGTGGTTGGAAGTGTTAATGGACAAGCTACTACATCAAATAGTGGATTGCATGGTACTTTGAATTTGTCATCAAGACCATCCTGTAGCTCTATCAAGATGCCATTGattgttgaaaatgaaaatgaaactcTTCAGGCAAATGTTATTAAAAGTAGAAACAATGATAATGGTATCACTAAATGTTACATGCCTAGCTTCACCAATGACTATTGGGATAGTTCCACATTTAGTGCTCCAAAAAATGGTGAATTCATGTTTTCCACTTCAAATGCTTTGGAAACTCAGGATGTAGATTTTAGATACCAAAAACATGGTTTGAGCCACCATTTGAGTCTTCCTAGCTCTTCTATTAAGATGACTACTATTGAGAAGTATTTACACCTTCAAGGATCAGTTCCATGCAAAATTCGTGCCAAAAGAGGCTTTGCTACTCATCCAAGAAGCATTGCAGAGAGGGAAAGAAGAATAAGAATTAGTGCAAGAATAAAAAAGTTGCAAGACCTTTTCCCTAATTCAGATAAGGTAATACACGTGCATATGTTTAAACTGATAGTGAATTTGACGAAATTACAGTGA 1116 0.3199 MSIVYQALDYSDGGSSRNSETQQHCHQNNSGLSRYDSAPTSLLTSLVDTSIGNFFNDETFTNDNHHQQHQNQHYSPSTSSEMETMLTNSESLYEFRDNKPMKEEENDPFSHGLQYNGYSYASQNQIIYQPQQNQGLANGFDGLFSAMSSLDSSNNCSNLIRQKSSPAEFFSNYSINNGFAVVGSVNGQATTSNSGLHGTLNLSSRPSCSSIKMPLIVENENETLQANVIKSRNNDNGITKCYMPSFTNDYWDSSTFSAPKNGEFMFSTSNALETQDVDFRYQKHGLSHHLSLPSSSIKMTTIEKYLHLQGSVPCKIRAKRGFATHPRSIAERERRIRISARIKKLQDLFPNSDKVIHVHMFKLIVNLTKLQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01287 371 MobiDBLite consensus disorder prediction 58 82 - -
Tsu08g01287 371 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 22 354 - -
Tsu08g01287 371 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 354 - -
Tsu08g01287 371 MobiDBLite consensus disorder prediction 9 36 - -
Tsu08g01287 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
Tsu08g01287 371 MobiDBLite consensus disorder prediction 8 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01287 Tsu-Chr8 14551792 14556225 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00524 03 4445344 4448682 Tsu08g01287 08 14551792 14556225 ECH
Tsu08g01287 08 14551792 14556225 Tsu08g01287 08 14551792 14556225 ECH