Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03070 ATGAACATGTCTCAGACTGAGAAGAATCCTGGTATTAGGCTATTTGGGTGGAAGATTCCGGTGCCGGAATGTCAAATTCCGACCAACTCTGGACCCATGGATACTTGCAGCAGTACAAAGAAAACAGAAGTGGAAATACTTTGTGCAGAAAAAACTGATCAATACAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCCCATCATGATATGCAAGAAAAGGAGCCAATAGTGAATTCAAAGTCCGCTGACGATAATACAGAGTCCGGTAATACGGATGAAGATAAAATCTTAAAGAAACCAGACAAAATTGTTCAGTGTCCGAGATGCAAAAGTTGGGACACTAAGTTTTGTTATTTCAACAACTATAACGTCAACCAACCTCGGCATTTTTGCAAGAATTGTCAAAGGTATTGGACTGCTGGTGGAACGATGAGAAATGTTCCGATAGGTGCTGGTAGGCGGAAGAACAAGCATCTAGCTTCTCAATACCGACAAATTATAGTAACCTCGGACGGAATTCCAACCTCGAGGCTTGAAACAACACCCTCATCCACTCATCACCATACATCAATGGATAACAAGACTGTATTAAAATTTGGTCCCGATACCCCTCTTTGTGAATCAATGGAGTCGATGCTTCAGCTTAAAGATCAGAAAAGGAGTTCTGATGCAAATTCTATTAGTTGTGTGCAACATAGAGAGGAACCATCCCTCTATGGATCGTCCGTAACAAATACCAACACTCAAGGAAATGAAGTATCAGAACACAATGCATCAAATTGGTTGCAGTGTTATCCGGTGCCTCCATGGGTATTACCAATGAATCCGGGTTGGAATATGAATAATGTTGCTTCCATGGCATCAGTTCATCCGACTTCAGCATCCATGTGCAACCCTTATAGCGTTGCTCCAACTACAATGCAATGGTGTCCGGCACCTATGTTGGCGATTCCGGGAATTAGGCCACAAAACATACCTTTGCAACTTGTACCAGCATCAAACTGGAGTGGACCATCACTTTGCCTCTCGCCGCCTTCCTCCATAAGTAACAGTTGCTGCACGGGTAATGGCTTGCCAACCCTAGGCAAACACACTAGAGATACCGTTTCCGCAGACGAAGATAAATCAGACAAGTCTGTCCCAGTTCGAAAAACGATTAGAATTAATGTCACAAATGAGGACCCGATAAGTCCTATTCGAGCTGCATTAGCTAACAAGACGCCAACTTAG 1233 0.4282 MNMSQTEKNPGIRLFGWKIPVPECQIPTNSGPMDTCSSTKKTEVEILCAEKTDQYNSSDSMDSKQESHHDMQEKEPIVNSKSADDNTESGNTDEDKILKKPDKIVQCPRCKSWDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRQIIVTSDGIPTSRLETTPSSTHHHTSMDNKTVLKFGPDTPLCESMESMLQLKDQKRSSDANSISCVQHREEPSLYGSSVTNTNTQGNEVSEHNASNWLQCYPVPPWVLPMNPGWNMNNVASMASVHPTSASMCNPYSVAPTTMQWCPAPMLAIPGIRPQNIPLQLVPASNWSGPSLCLSPPSSISNSCCTGNGLPTLGKHTRDTVSADEDKSDKSVPVRKTIRINVTNEDPISPIRAALANKTPT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03070 410 MobiDBLite consensus disorder prediction 175 195 - -
Tsu07g03070 410 MobiDBLite consensus disorder prediction 362 381 - -
Tsu07g03070 410 MobiDBLite consensus disorder prediction 367 381 - -
Tsu07g03070 410 Pfam Dof domain, zinc finger 102 159 IPR003851 GO:0003677|GO:0006355
Tsu07g03070 410 ProSiteProfiles Zinc finger Dof-type profile. 105 159 IPR003851 GO:0003677|GO:0006355
Tsu07g03070 410 MobiDBLite consensus disorder prediction 175 191 - -
Tsu07g03070 410 MobiDBLite consensus disorder prediction 53 97 - -
Tsu07g03070 410 ProSitePatterns Zinc finger Dof-type signature. 107 143 IPR003851 GO:0003677|GO:0006355
Tsu07g03070 410 MobiDBLite consensus disorder prediction 62 97 - -
Tsu07g03070 410 PANTHER CYCLIC DOF FACTOR 3-LIKE 3 407 - -
Tsu07g03070 410 PANTHER CYCLIC DOF FACTOR 2 3 407 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03070 Tsu-Chr7 36568147 36570601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03070 9 407 C2C2-Dof Transcription Factor Family AT5G39660 33.407 4.57e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tsu07g03070 zf-Dof 1.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03070 - - cam:101500722 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03070 07 36568147 36570601 Tsu07g03070 07 36568147 36570601 ECH