Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00964 ATGTCTGGTCGGAATGAACATGTTCCTCTTTCGGTGCTGTTGAAGCGTGAATTGGCGAATGAGAAAATCGAAAAATCTGATATGGTTGTTGTGTATAGTCAAGCTAGCGAGAATAagaaaggagaagattttaCATTGTTGAAGAATGAATGTCAAAGAGTTGTGGCTGATGGGGTCTCTACATATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTAAGTGCCATTCCTACAGATCTCAACAGAGATGAGTGGGTAAAAGCGTTACCGAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAGAGCAAAAACATCAGGAACAACTGTAACCCTTGTGATTATAGAAGGATGGGTTATAACAGTTGCATCAGTTGGTGATTCCCGGTGCATACTTGAACCTTCTGAAGGCGGGCTTCATTACTTGTCAGCAGATCATCGACTAGACACAAATGAAGAGGAGAGGGCGCGCATCACTTCTTGTGGGGGTGAAGTCGGTCGGTTAAATACAGGCGGAGGTGCAGAGGTTGGTCCATTGAGATGTTGGCCCGGTGGTTTGTGTCTCTCTCGATCCATTGGTGATATGGATGTTGGCGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCCACTTCTGGAGGAAGGCTTATCATTAGTAGTGATGGGGTCTGGGATGCTCTATCTGCAGAAATGGTTGTTGATTGTTGTCGTGGCATGTCAGCGGAGGCTGCAGCACCGCATATTGTAAAGGAATCTTTGCATGCAAAGGGACTTAGAGATGACACAACCTGCATTGTGGTCGATATTTTACCCCAGGAGAAGCCACCTACTTCTGTACCATCACAAAAGAGACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGCAAAAAGTCCTCCGAGCCATCTTCATATATTGTAAGAGAATACGTTGAGCCAGATATGGTACGGGAAATATACGAGGAAGGATCTGCTATGCTTTCAGAGAGgtttgaaacaaaatatccACTTTGCAACATGTTCAAGATGTTCGTGTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAGGGTGCCCCTAACCAAGGGAAACTGCGCCCCTGGGATGGACCTTTCCTTTGTTCAAGTTGCCAAGAGAAGAAACAAGCCATGGAAGGGGGACAACAAGAAACGAAACAAGCCATGGAAGGGAGACGAACAGCAGGTGTGGGTTGCCAGGAAACGAAACAAGCCATGGAAGGGAGACAACAAGAGACAAAACAAGCCATGGAAGGGAGACAACAAGACACGAAACAAGCCATGGAAGGGAGACAAACATCAGGTGTGGGTTGCCAAGAGACGAAACAACCCATGGAAGGGAGACAAACGTTGAAACAAGCCATGGAAGGGAGACAAACATCAGGTGTGGATCATCAAGAGACGAAACAAGCCATGGAAGGGAGAGAAACATCAGGTGTGGGTCGTCAAGAGACGAAACAAGCCATGGAAGGAAGACAAACATCAGGTGTGGGTCTCCAAGAGACGAAACAAGCCATGGAAGGGAGACGAACATCCGGTGTGGGTTGCCAAGAGAAGAAACAAGCCATGGAAGTGAGAAGAACATCAGATAGACATAGCAGTCGAACCGACTAA 1719 0.4508 MSGRNEHVPLSVLLKRELANEKIEKSDMVVVYSQASENKKGEDFTLLKNECQRVVADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPTDLNRDEWVKALPRALVAGFVKTDKDFQQRAKTSGTTVTLVIIEGWVITVASVGDSRCILEPSEGGLHYLSADHRLDTNEEERARITSCGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTSGGRLIISSDGVWDALSAEMVVDCCRGMSAEAAAPHIVKESLHAKGLRDDTTCIVVDILPQEKPPTSVPSQKRPVKGMLKAIFRKKSSEPSSYIVREYVEPDMVREIYEEGSAMLSERFETKYPLCNMFKMFVCAVCQVEIKPGEGISVHEGAPNQGKLRPWDGPFLCSSCQEKKQAMEGGQQETKQAMEGRRTAGVGCQETKQAMEGRQQETKQAMEGRQQDTKQAMEGRQTSGVGCQETKQPMEGRQTLKQAMEGRQTSGVDHQETKQAMEGRETSGVGRQETKQAMEGRQTSGVGLQETKQAMEGRRTSGVGCQEKKQAMEVRRTSDRHSSRTD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00964 572 MobiDBLite consensus disorder prediction 455 479 - -
Tsu07g00964 572 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 5 421 - -
Tsu07g00964 572 Pfam Protein phosphatase 2C 53 281 IPR001932 -
Tsu07g00964 572 CDD PP2Cc 31 293 IPR001932 -
Tsu07g00964 572 MobiDBLite consensus disorder prediction 491 572 - -
Tsu07g00964 572 PANTHER ALPHABET, ISOFORM E-RELATED 5 421 - -
Tsu07g00964 572 MobiDBLite consensus disorder prediction 441 479 - -
Tsu07g00964 572 SMART PP2C_4 19 291 IPR001932 -
Tsu07g00964 572 SUPERFAMILY PP2C-like 30 293 IPR036457 -
Tsu07g00964 572 MobiDBLite consensus disorder prediction 555 572 - -
Tsu07g00964 572 ProSiteProfiles PPM-type phosphatase domain profile. 32 293 IPR001932 -
Tsu07g00964 572 MobiDBLite consensus disorder prediction 516 542 - -
Tsu07g00964 572 Gene3D - 20 300 IPR036457 -
Tsu07g00964 572 SMART PP2C_SIG_2 47 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00964 Tsu-Chr7 7942992 7947213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00964 1 415 PP2C-type Phosphatase Gene Family AT1G47380 74.820 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00964 07 7942992 7947213 Tsu07g00964 07 7942992 7947213 ECH
Tsu01g00385 01 3243716 3249413 Tsu07g00964 07 7942992 7947213 PCT