Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00962 ATGCAAGCGGTTGGAAGATTAGGAAGTTACATCAGTCAAGGCGTATACACCGTTTCCGGCCCTTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAAAAAGACGGTTCATTCAAATCATCACCATGGTATGTTAGATTTGGTAAATTCCAAGGTGTTTTAAAatctaaagaaaaaattgttcaaatcaATGTTAATGACATTGATGTTGATTTTCAAATGCATCTTGATAATAAAGGAGAAGCAttctttttaaaagaaattgatgatgttgaaacaGTTTTAAATATTGATCCATCAGAATCTGGTGATGATGCTGATGATCAATCTTTTAGGTCTAAGAATAGTAATTTAGGTTCTGAAGATGGTGGAATGGTAGGGAGATGTAACTCTCGTCGTTCGCGAATACTTGGTCTTATGTTTGGGAGAAGATCTTTGAGTGGTGAATTTGAAGATGCTATTGGGAATAAAGAACGCGCTGAGATTGCTGCTAATTTGTTGGATATTAAGTGGTCTACAAATGGTGATCATGCTGTTGTTGTGGAGAATGAAGATGGTTCTTTTGGTGTTGTTGCAAAGCATGAAAAGAAATCGAATGGAGAAGAGGTTTCTGGTCGTAACGAGAATTCTAAAGAGGTTAGTTGTTCAAGTGAACAAACTCATGAGGTTATGAATCTTTCTCATGGCGAAAGTGGAGAGGTCAATGGCCACGATCAAGTCATGCGTTCACTCCCGTCTGAGGCTCAGCAAAGGGACTCTTCTGATTCTGAAGTTAGTATGTACGATGTGGAGGATGTTGAAAATAACTATTTGGATAGAGGACATTGTTCAAGTGAGAATGTTGGGTCCTATAGTGTTACCAACGCTTCCAGTTACTACAGCCAGGATGAACAAGGATCATGGGAGCATAACACGAAGGATAAAGATTTATCTAGTAGCACGATATCAACTCCAAAATACCCTCTTGGTGATGGTTTACCTAGTGAAACATCAAGGAGACCATCGTCCTCGAGTTCAGATGAAGATAATTTCCTTTTTAGTGACATTGATGAAGAAGATAAAGAAGATAATCTTTCTTATGAGAATGGCACTAAACTCTCAAGAATGACATCCTGTCCCATGGCTATCCCTAGAAATAAGGATGCTGGGGGGGAAGTTGGGCAACACACAGCATCCTTGCCAAATAGTCCTACTCGTAGTAACAGGAGGCGCAAACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCGACATTTCCTGGCAGAGATGGCATGGAATGTTTAAAATTCGATGAgtgtaaaaaaaagaagctacCGCATGAGCAGGCAGGTGCCAAAGGTTACCAAGATTCTAATAATCAACCTCCTGGAGGTACGTCAACAACCGGCTCTTGGAGACTTTGGCCTTTCCCCTTGAGCAGATCAGTAGTGTCTAGAGAATCTTTGCCACCTATTCCAAATGAtgccaaaaataatactaatccCAATTCTCCAGAGAATAAGATTTCCAAAGATGTGAACAAAAATGATACTAAACCCCCTAAACCCAATCAAACGAAAAAGAAGGTTAGAGAAACAACTCCAACTTCTGAACAGATAGCATCGTTGAATCTGAAGGAAGGGAGGAATATTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGCAACAGCAGGTTGATGCTCAAATATATCTATGGAAATGGGACGATCGCATAGTTATCTCAGATGTGGATGGTACAATTACAAAGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCACATTTATTCTCCGCTGTCAAGGAGAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTTAATCTTAAACAGGACGGCAAAGTTTTACCAGAGGGCCCTGTTGTTATTTCCCCCGATGGACTTTTTCCCTCTCTATACCGTGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATTGCATGCTTAGAGACTATCAAGGCTCTTTTTCCTGCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGACGAAATCAGTTACCTTAAAGTTGGAATCCCTTTAGGAAAAATCTTCATTATAAATCCCAAGtttgcaGGGAGAGATAGTTGTGAACCGAAGTCTTGA 2211 0.3903 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQKDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNDIDVDFQMHLDNKGEAFFLKEIDDVETVLNIDPSESGDDADDQSFRSKNSNLGSEDGGMVGRCNSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNGDHAVVVENEDGSFGVVAKHEKKSNGEEVSGRNENSKEVSCSSEQTHEVMNLSHGESGEVNGHDQVMRSLPSEAQQRDSSDSEVSMYDVEDVENNYLDRGHCSSENVGSYSVTNASSYYSQDEQGSWEHNTKDKDLSSSTISTPKYPLGDGLPSETSRRPSSSSSDEDNFLFSDIDEEDKEDNLSYENGTKLSRMTSCPMAIPRNKDAGGEVGQHTASLPNSPTRSNRRRKHVRYPLSQSLDSTFPGRDGMECLKFDECKKKKLPHEQAGAKGYQDSNNQPPGGTSTTGSWRLWPFPLSRSVVSRESLPPIPNDAKNNTNPNSPENKISKDVNKNDTKPPKPNQTKKKVRETTPTSEQIASLNLKEGRNIVTFTFSTAMLGQQQVDAQIYLWKWDDRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQDGKVLPEGPVVISPDGLFPSLYREVIRRVPHEFKIACLETIKALFPADCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPKFAGRDSCEPKS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00962 736 MobiDBLite consensus disorder prediction 300 367 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 488 505 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 449 469 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 101 128 - -
Tsu07g00962 736 SMART lns2 575 731 IPR031315 -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 506 530 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 380 410 - -
Tsu07g00962 736 Pfam LNS2 (Lipin/Ned1/Smp2) 529 725 IPR013209 -
Tsu07g00962 736 PANTHER GH19076P 1 725 - -
Tsu07g00962 736 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 332 346 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 197 224 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 442 469 - -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 482 534 - -
Tsu07g00962 736 PANTHER LIPIN 1 725 IPR026058 -
Tsu07g00962 736 MobiDBLite consensus disorder prediction 197 211 - -
Tsu07g00962 736 SUPERFAMILY HAD-like 567 719 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00962 Tsu-Chr7 7923100 7930248 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00962 07 7923100 7930248 Tsu07g00962 07 7923100 7930248 ECH
Tsu01g00388 01 3261489 3267405 Tsu07g00962 07 7923100 7930248 PCT