Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00928 ATGGCACTGATCTTAGTCGTGTTCACGCTCTTCACCGTGACATTTGCGTTGGACATGTCTATCATTTCATATGACACAACCCACGCAGACAAATCTTCGCGGAGGAGTGACGATGAGGTAAAAACCATGTACCATGAGTGGCGCGTGAAGTACGGAAAGATCAATAACAATCTGGGTGAAAGCCAAAAGGATAAGAGATTTGAAATCTTCAAAGACAATCTCAGGTTCATCGGCGAACACAATGCTGAGAATCGAACATACAAGGTTGGGTTGAACAGGTTCGCTGATCTTAGCAACGAAGAGTATAGGGCTAGGTACCTAGGAATTAGGATTGACCCAATTGAAAGGATGATGGCAAGGACTAAGACGAGCAGCAACCGTTATGCTCCAAGTGTTGCTGATAAATTGCCCCAATCCGTTGATTGGAGGAAAGAAGGTGCTGTTGCCCAAGTCAAAGACCAACAAAATTGCGGAAGCTGTTGGGCTTTTTCAGCAATTGCTGCCGTGGAAGGGATTAATAAGATAGTCACAGGGGAGCTTGTTTCGCTATCAGAACAAGAACTTGTTGACTGTGACAAAACAGTTAATGCAGGATGCGATGGCGGACTTATGGAGTATGCCTTTGAGTTCATCATAAACAATGGTGGTATCGACACTGATGATGATTATCCCTATCTCGGTGTTGATGGTATATGTGATCAATACAAGAAAAATTCTAGAGTTGTTACACTTGAGGACTACGAACAGGTTCCTGCCTATGATGAGTTAGCTTTGACAAAGGCTGTAGCAAATCAACCAATAAGCGTTGCCATTGAAGCTGGTGGTAGGGCATTCCAGTTGTATGAATCCGGCATATTTACCGGAAGATGTGGGACAGCATTAGACCATGGTGTTACCGCTGTTGGGTATGGAACagaaaatggagttgatttttgGATAGTGAAGAATTCATGGGGTAAGGACTGGGGAGAATCAGGTTATTTCAGATTGGAACGTAATCTGAGGACAAGCGTGAAAGGCAAATGTGGAATTGCAATGCAATCTTCCTATCCCATAAAGAATGGCCAAAATCCAGTTAAACTGCACTAG 1089 0.4298 MALILVVFTLFTVTFALDMSIISYDTTHADKSSRRSDDEVKTMYHEWRVKYGKINNNLGESQKDKRFEIFKDNLRFIGEHNAENRTYKVGLNRFADLSNEEYRARYLGIRIDPIERMMARTKTSSNRYAPSVADKLPQSVDWRKEGAVAQVKDQQNCGSCWAFSAIAAVEGINKIVTGELVSLSEQELVDCDKTVNAGCDGGLMEYAFEFIINNGGIDTDDDYPYLGVDGICDQYKKNSRVVTLEDYEQVPAYDELALTKAVANQPISVAIEAGGRAFQLYESGIFTGRCGTALDHGVTAVGYGTENGVDFWIVKNSWGKDWGESGYFRLERNLRTSVKGKCGIAMQSSYPIKNGQNPVKLH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00928 362 CDD Peptidase_C1A 137 351 IPR039417 -
Tsu07g00928 362 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 356 - -
Tsu07g00928 362 Gene3D Cysteine proteinases 17 354 - -
Tsu07g00928 362 Pfam Papain family cysteine protease 136 352 IPR000668 GO:0006508|GO:0008234
Tsu07g00928 362 PRINTS Papain cysteine protease (C1) family signature 296 306 IPR000668 GO:0006508|GO:0008234
Tsu07g00928 362 PRINTS Papain cysteine protease (C1) family signature 311 317 IPR000668 GO:0006508|GO:0008234
Tsu07g00928 362 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Tsu07g00928 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 294 304 IPR025660 -
Tsu07g00928 362 SUPERFAMILY Cysteine proteinases 37 352 IPR038765 -
Tsu07g00928 362 SMART pept_c1 136 352 IPR000668 GO:0006508|GO:0008234
Tsu07g00928 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 311 330 IPR025661 -
Tsu07g00928 362 SMART Inhibitor_I29_2 44 102 IPR013201 -
Tsu07g00928 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Tsu07g00928 362 Pfam Cathepsin propeptide inhibitor domain (I29) 45 102 IPR013201 -
Tsu07g00928 362 PANTHER CYSTEINE PROTEASE 25 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00928 Tsu-Chr7 7601360 7605082 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00928 07 7601360 7605082 Tsu04g02119 04 23410362 23413266 ECH
Tsu07g00928 07 7601360 7605082 Tsu01g04766 01 54805721 54808401 ECH
Tsu07g00928 07 7601360 7605082 Tsu07g00928 07 7601360 7605082 ECH
Tsu01g00431 01 3637276 3641276 Tsu07g00928 07 7601360 7605082 PCT