Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00913 ATGAATCTTTACTCAAAGCTATCAACAGGTAGAATCCAATTCAGCTTTACCATCATCCTCTTATCAATCATTTTGGCTTGGAAATTCTCCTCACTTGATCCTTTATCTACatccaagaagaagaacaagaacaacCTTACTAGTACTGAAATAGACAATGATGATTCTGTTATTTCTGAAGCCTACAATTATCTTCTCTCAACGGAGAAAAAGAGAAAACCAATGATAGATTATATGGAAATAGTTCAGACAGACATTGATCGAAATCGGAGAGGAATATGTATTGATTGGGTAGTAAGTCTTGTAGATTATTTCAAGCTTCTTCCTGACACCCTTTATTTCACTGTTTCATGCATAGATAGGTTCCTATCTTTTAAACCTATCAGTGCGAACAAGCTTGAATTGTTGTGTGTTTCATCGATGTTCATTGCATCGAAGTATGAAGATACTTTCCCACCCGAGGTGGAAGAGAACCGCgattgtaccaaaaataaatccAGCAAAGAAGAGGATTTGAGATTGCAGTTTGAGTTCTTGAGTAACTATCTTGCTGAGATAAGTTTATTGGATTATGATTGTTTGATGTTCTTGCCTTCTACGGTGGCCGCGTCTGTCACATTTCTTGCTAGATTCATCATTTGGCCTGAAACTTATCCCTGGGCAAGTATTTGA 672 0.3482 MNLYSKLSTGRIQFSFTIILLSIILAWKFSSLDPLSTSKKKNKNNLTSTEIDNDDSVISEAYNYLLSTEKKRKPMIDYMEIVQTDIDRNRRGICIDWVVSLVDYFKLLPDTLYFTVSCIDRFLSFKPISANKLELLCVSSMFIASKYEDTFPPEVEENRDCTKNKSSKEEDLRLQFEFLSNYLAEISLLDYDCLMFLPSTVAASVTFLARFIIWPETYPWASI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00913 223 CDD CYCLIN 91 169 IPR013763 -
Tsu07g00913 223 Pfam Cyclin, N-terminal domain 61 177 IPR006671 -
Tsu07g00913 223 CDD CYCLIN 167 220 IPR013763 -
Tsu07g00913 223 Gene3D - 74 171 - -
Tsu07g00913 223 PIRSF Cyclin_A_B_D_E 22 172 IPR039361 -
Tsu07g00913 223 PIRSF Cyclin_A_B_D_E 159 223 IPR039361 -
Tsu07g00913 223 SUPERFAMILY Cyclin-like 57 177 IPR036915 -
Tsu07g00913 223 Gene3D - 174 215 - -
Tsu07g00913 223 Gene3D - 62 73 - -
Tsu07g00913 223 PANTHER CYCLINS 54 174 IPR039361 -
Tsu07g00913 223 PANTHER CYCLINS 173 222 IPR039361 -
Tsu07g00913 223 PANTHER CYCLIN-A3-1-RELATED 54 174 - -
Tsu07g00913 223 PANTHER CYCLIN-A3-1-RELATED 173 222 - -
Tsu07g00913 223 SUPERFAMILY Cyclin-like 167 219 IPR036915 -
Tsu07g00913 223 SMART cyclin_7 96 180 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00913 Tsu-Chr7 7442309 7443813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00913 58 220 Core Cell Cycle Gene Families AT5G43080 42.564 8.05e-47 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00438 01 3727528 3730545 Tsu07g00913 07 7442309 7443813 PCT