Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00361 ATGGCGAAATCAAGTGCCGACGATGCCGAACTCCGGCGAGCTTGCGAGGCTGCAATTGAAGGCACCAAGCAGAAGATCGTCATTTCCATCCGAACCGTCAAGACTCATAGCACCTGGGGAAAAGCGGCCAAGCTTGGCGGTGGTCGTCAAATGGCTAAACCTAGGGTTCTCGCTATCTCTACAAAAGCGAAATCTCAACGGACAAAAGCTTTTCTTCGAGTTTTAAAGTATTCGAATGGAGGAGTTCTTGAGCCTGCTAAGATATACAAGCTGAAGCATCTCTCAAAAGTAGAAGTTGTAACAAATGATCCCAGTGGATGTACATTTACGTTGGGATTTGACAACCTTAGAAATCACAGTGTGGCTCCTCCACAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTGCTGTCTATCTTGAATATCTGCAAAGATGTCCTGGGTCGCCTTCCGAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCACTCAAAATAACCAATCAGATGGTGCTTCTGTTGTATCTGATGTCACTGAATCAGAATTGAAAGTCAACGTTGAAAAGGACCTTGTCTCACAAGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAAATTATATCACGGGTATTAGTCAAGCAGAGGCTTTTTCTGAAAGGTTGAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCTATTTTAGAAAGTGAACCTTTGATAGATGAGGTGCTACAAGGGCTTGAAGCTGCTTCAAATTGCGTGGAAGACTTGGATGAATGGTTAGGCATGTTCAATGTGAAACTCCGACACATGAGGGAGGATATTGAATCAaTTGAAATCCGCAATAACAAATTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAGGAGCTTGATAAACTTCTTGAGCAATTGAATATCCCTTCTGAGTATTCAGAATTTTTGACAGGAGATTCATTTGATGAATCGCAAATGGTTCAAAATGTAGAAGCGTGTGAGTGGTTGATCGGTGCCTTGCATggttttcaagcttctaacatAGATCCTACTTATGCAAAGATGAGAGCTTTTAAAGAGAAGCGAGGagaacttcaaataataaaatctatttttgtcACGAAAGTTTCTGAATTTCTGAGGAATTACTTTGCTACTTTTGTTGATTTCATGATGAATGATAAAAGTTACTTTTCTCAGCGGGGGCAGTTGAAAAGGCCAGATCATTCTGACCTGCGATACAAGTGCAGGACATATGCACGCCTTTTGCAACACTTAAAGGTTCTTGACAAGAATTGCTTGGGCCCATTGAAAAAGGCTTATTGCTGTTCTCTAAACTTGCTTCTTCGCAGGGAGGTCCGTGAGTTTGCTAATGAACTTCGTGCAGAATCTAAAACTTCCCCAGGTTCTGGTCAGAATGTAAATTCTGCTGACTCTTCTGCAGTTTCTGATGCATATGCAAAGATGCTCACCGTTTTTATCCCACTTATGGTGGATGAGAGTTCTTTTTTTGCACGCTTCATGTGCTTCGAAGCTCCTACAGTTGATGGTAATAAATCTGGACACAATGATGATGCTAACGATGATGATTTGGGAATTGCAGACATTGATGAGAATGATAGTAAATCTAGTTTGAATCCTGCGGAGCTTGCAGCTTTAAACGAAGCACTTCAGGATTTGCTTGATGGAATCCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATGTAAGATTGATCCTTTGTGCTGCATATCAATGCATGGAATAACAGAACGCTATCTCTCTGGTCAAAAAGCTGATGCATCAAGATTTGTCAGCCTTATGCTTGCTGAACTTGAGTCTCGGATATCTATGCTATTCATTCGTTATGTTGATGATTCTTGCCATAATATTGAAAAGTGTGAGCGCAATCAGAAACAAAGTGTCCTACCCTACATTCCCAGATTTGCAACCCTTGCAACAAAGATGGAGCAATACATTGCTGGACAGTCTAGGGATTTGGTTGACCAAGCATACATGAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAGACTTGCACAAACAGAGCCAAAGTATGCAGATATTTTCCTTATAGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTAGCCAATGTGGTGCCTACTTTGGCCAAGTTTTATCATCAAGCTAGTGAAGCGTATGAGCAATCATGCTCACGCCATATTAGCATGATTATCTATTATCAATTTGAGCGCCTATTCCAGTTTGCTCGAAGGATTGAGGACTTGATTTTAAATAATGTTTCACCCGAAGAGATTCCTTTCCAGCTTGGGCTGTCAAAAGTGGATTTTCGAAAGATGCTAAAATCAAGTTTGTCTGGGatGGACAGGTCCATTGGTGCAATGTATaagaaattgcaaaaaaatttgACTTCAGAGGAACTGTTACCTTCCTTGTGGGATAAATGCAAGAAGGATTTTGTTGATAAGTACGACAGTTTTGTCCAACTTGTTGCCAAGATTTACCCTGCTGAGTCAGTCCCTACTACAGCAGAATTGAGAGAGCTTTTAGCCAAGATGTAA 2616 0.4041 MAKSSADDAELRRACEAAIEGTKQKIVISIRTVKTHSTWGKAAKLGGGRQMAKPRVLAISTKAKSQRTKAFLRVLKYSNGGVLEPAKIYKLKHLSKVEVVTNDPSGCTFTLGFDNLRNHSVAPPQWTMRNIDDRNRLLLSILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVSTQNNQSDGASVVSDVTESELKVNVEKDLVSQAEEEDMEALLGNYITGISQAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAASNCVEDLDEWLGMFNVKLRHMREDIESIEIRNNKLEMQSVNNKSLIEELDKLLEQLNIPSEYSEFLTGDSFDESQMVQNVEACEWLIGALHGFQASNIDPTYAKMRAFKEKRGELQIIKSIFVTKVSEFLRNYFATFVDFMMNDKSYFSQRGQLKRPDHSDLRYKCRTYARLLQHLKVLDKNCLGPLKKAYCCSLNLLLRREVREFANELRAESKTSPGSGQNVNSADSSAVSDAYAKMLTVFIPLMVDESSFFARFMCFEAPTVDGNKSGHNDDANDDDLGIADIDENDSKSSLNPAELAALNEALQDLLDGIQEDFYAVVDWACKIDPLCCISMHGITERYLSGQKADASRFVSLMLAELESRISMLFIRYVDDSCHNIEKCERNQKQSVLPYIPRFATLATKMEQYIAGQSRDLVDQAYMKFVSIMFVTLERLAQTEPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQSCSRHISMIIYYQFERLFQFARRIEDLILNNVSPEEIPFQLGLSKVDFRKMLKSSLSGMDRSIGAMYKKLQKNLTSEELLPSLWDKCKKDFVDKYDSFVQLVAKIYPAESVPTTAELRELLAKM 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00361 871 SMART Sec3_PIP2_bind_2 50 148 IPR028258 -
Tsu07g00361 871 Pfam Exocyst complex component Sec3 226 495 IPR019160 GO:0000145|GO:0006887
Tsu07g00361 871 Pfam Exocyst complex component Sec3 500 854 IPR019160 GO:0000145|GO:0006887
Tsu07g00361 871 PANTHER SEC3/SYNTAXIN-RELATED 1 871 - -
Tsu07g00361 871 Coils Coil 223 250 - -
Tsu07g00361 871 Coils Coil 283 320 - -
Tsu07g00361 871 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 51 146 IPR028258 -
Tsu07g00361 871 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00361 Tsu-Chr7 2706663 2727119 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00361 07 2706663 2727119 Tsu07g00361 07 2706663 2727119 ECH
Tsu01g00346 01 2871460 2887136 Tsu07g00361 07 2706663 2727119 PCT