Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00345 ATGTCTCACCGTTCTTCTGCCACCGCCCTCCACATCTCCACCGCTCCTCCTTTTCAGATCTCCAAAGATTTTCAAGGCTCTGACAATCCTATTCCACTCTCACCTCAGTGGCTTCTGCCAAAGCCAGGGGATGGAAAACCTGGAGCAGGAATTGTGGAAAACCATGTGATCTCAACTCCATCATTTGGCAATCGCTCAGAGACCGTTAAGACGTctggaaatggagaggatgtGCATGACGACCATAAGAGAAAGGACGTCTTTAGGCCATCTGTGCTTGACTCTGAAAGTGGGCGTCATGACCGTTGGCGCGATGAAGAGCGAGACACCAAGTTCTCCGTACGCAAGGATCGATGGAGGGATGGTGACAAGGTCTCAGGTGATGCTCAGAGAAGGGACCGATGGGTGGATAACCCATCCACAAGGAACTTCGGAGAAACACGTCGTAGTACATCTGATAGATGGAATGATTCAGGTAATAGGGAAATGAATTTTGATCAGCGGCGTGAGAATAGGCGGACCTCACGCTGGGGTCATGATGAGAAGGAGCCTGAAGTTTTTCATGAGAAACAGAACGAATCTGGTAAAAATGGTGATCTGCATCTGGACAAAGTTATGTCTCACATTTCCAATCCTGGTAAGGATGAAAAGGAAGGGAAGATAGAGCCATGGAGACCTAGCTCCTTTCAAAGACGTGCGAAGACAGAGACTTCCCATCAGCAGAATGTGACACCCAGCAAACAAGTGCCTATATTCTCTTCTGGGCGGGGCCGTGGGGAGGATACACTTCCAGTTGCTAATCCTGGACGTGGTTGGTTTGGCTCTGGTGGGAGCCCTACAAGTAGCTCGTATATGCATTCTCAATACCCTCAAACTGGATTGGATAAAGTTCAAAGTGAGCGTGGAGAAACTCATCCATTTAGATATAGTAGGACTAATATCCTTGATGTGTACAAAGTGACTGATGTGCATACAGCTATAAAACTAGTCGATGATTTTGCGCAGGTTCCTCCCTTTACACAAGACGAACCATCGGAGCCTCTAGCTCTCTGTGCACCAACTTCTGAGGAACTGACCGTCTTAAAGGGTATCGACAAAGGAGAAATAATTAGTAGCAGTGCACCTCATGTGCCAAAAGATGGAAGGAACTCAACAGAATTTACACATTCAAGACAAATGAAGCATGGAAATGCACCTCTCCAAgATAGAGGTGAAGACGGAGGTTCTTATAAAGTAGCTGATGAGGTGCATAGTAACAGAGAATCAgcctttgaagaaaataattctGTTCGTCCTGGTACTGGATGGCATGCCACATCGCTGGGCGAACAAGCAAGCAGTCTCGTGCATGATAGCAAAGATGTGCCTGGTGATGTCAGGTCAAGACACTCAGATATGAAGTCGTCATACCAGCCAAAAGATTTTCGTACTCAGTGGGAAAATAATATGGACTATTCATCCGATGCCATAGATGTAGCTAAGTGGCAATCTGGCGAAAATTCAATTGTTAAAAGGCAGCCAACTGGCTTTTTGGATGGTGAAATTGAAACCAGGAAAGTTCCGCAGACTTCTCCAGAGGAGTTATCCCTTTTCTATAAAGACCCCCGAGGTCAAGTTCAAGGTCCATTCAAAGGAATTGATATTATTGGATGGTTCGAGGCTGGATATTTTGGTATTGATTTACTAGTTCGTCTGGAAAGCGCAGCAGCTGACTCGCCATGGTTCCAACTTGGTGATGTCATGCCTCATTTACGAGCTAAAGCCCGACCACCACCTGGGTTCCCTGCAACAAAACTTGACACTACAGAGGCACCTGTTCGGCAAAGTTCCAATACCTTTGGGAATATTCCTACTGGGCCTAGTGAGGTTGAGACGTTGAGAAATAATTCCATGCATGGACTGGGTTCTGCTACTGAAGCTGAAAATAGGTTTTTGGAGTCGCTCATGTCTGGTAGCAATAGCAGTCCCCCACTTGAAAACCTGACATTATCAGAAGGAATACAAGGGTTTATTGGAAACAATTCTAGTAATTTGGGTCCATCAGGAGTTGATGGTGGAAACAACCCATACCTGCTGGCCCAGAGGATGGCACTTGAACGACAGAGGTCCTTTCCGAGTCCTTATCCATACTGGCCAGGGATTGATGCAGGATCCCTTCCACCAAAATCCGACTTTGTTCCAGATGCATCACCACATTCAAAACTCATGTCTTCATTGAGCGGCAATTCTCGACAGCTTCAGTACCAAAATTCTGAGTTGAACTCAGTTATCCAAGGATTATCCGACAGGGGATCCACAGGCTTAAATAATGGTGTTACCAGCTGGTCAAATTATCCCTTACAAGGTGGATTGAATCCCCTTCAGAATAATATTGACTTACATCGTGATCAAAATTTTATACCATTTGGAATTCAACAACAAACATATCAAGCACCAAaccaattttcttttaataactTAATAGCTCAAACTGTAGATAACCCTTCTAGTATTTTGGCAGCAGAACAGTTGTTTTCTTCCAGTTTGTCCCAGGATCCCCAGATGGTGAATATGTTGCAACAGCAATACTTGCTGCAGTTGCATTCTCAGGCAACAACTCCTTCACAGCATATATTAGATAAACTCCTATTTTTGAAGCAGCAGGAGGAGCAACAGCTGTTAATGCGCCAACAACAGCAATTGCTTTCTCAAGTGCTGCAGGGGCATCATTCTCACCAGCACTTTAGTGATTTGTCTTATGGACAGATGCAGGCTGGTGGAGTGCGAATGGGGAATTTGCATGTGGACCCTTCTCAACGTCAACCATCCCATGAAATTTTTCCTATGAGTTCTCAGACACCAGTTCCCAGTGTGCATGATGAGCTTAGTACCCAGTCTTTGAATTTATCTCTGCAAGAAAGCCAAGGTACAAGCTTTAATAAAAGCATTGAATCTTCTGTGCAGCTGCCTCATCAATTATTTGGGAATATTAGTCATCATAAAAGTTGGGACACTACTATTCCTGAGCAAATTAATGAACAGTACCAGAAAGAAACATCGCCTGCATCCGCTCCTGTTGAAAGTTTCTTATTGCATGAGCAGAATAGGACCACAGAAGAACCTAATATTGCACAGAAACCTTTTTCCGCTTCTGACTGCAATGTTGAATATGTGGAGCAGATGTCAGATAACAACGGTACGGCTGATGGTACTCTTGTGAATGCCATTTCAGAGTCTGTTGAGCATTCCAAACCTGCTCTGTGTGTTGAACCTGTTATTGCGGCGTCTTCGGCTGAATCTTGTGAGATTGAGTTACCACCGGCAGGTCAACTGGGTATGGATATGGAAATTAAACCAGGTAGTGTTGAAGAACAGGTAGGTGGAAGAGTCATCTCAAATGTTGAGCCATCTGTGGCGGGTGCAAGAGATATTGAAGTGCGAGAACCCAAAAAGGCTACTGAGAAGAAACCGAAGAAGCAAAAATCTTCCAAATCCCAATCTTCTGGTCAAGCAAAGGGATTGCTAAAAAATGCAACTTTGCAGCAGTCAAATAATTCAGAACctaaaaagtcaaattatagtgaaatcaatttgaaggAAGTCAATAGGGATGAAGAAGATTATGAAACACATCTCAAACAAACAAGTGGTGAAGACAGTTTATCCAGAACTGCTATCACAAAGGCAGTTGTTCATCAAGAAGTTAGTGATCTCCCTGCTAATATTCAAGAAAGCATCACTGAAACAGTTGTTGAGAATGACTCAAAGTCATTAAGTTCTGTTGCCATACAGACTACTGAATTGCCTGCAGGGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCGAAGTCTTTATTAGAAATTCAACAGGAAGAACAGAAAAAGGCACAGACAGAGATGCCTGTAATTGAGGTTGCTACTACTGTCAATTCCCTCGGTGTGACTACTCCCTGGGTTGGAGTTGTGGCCAATCCAGACTCTACAAAAGTGTCTAGTCAAAATCACAAAGAAGCAGGTAGTACTGAAAATCTGGTCAAAACCAAAACTTCTCAAAATAGCAAGAGTAAGAAAAGTCCATTGCATGATCTATTAGCAGAAGATGCAGAGAGCACAGGTCCAGACAGTATATCATTCTCACAATATATATCTGCTGCCCATTCAGAACCAATTGATGACGGAGACTTCATTGAAGCTAAAGACACTAAAAGGAACCGgaaaaaatctacaaaatcGAAGGGTTCAGGGTCTAAGATCTCAAAGCCAGTTGCTTCTAGTGAAACACCAATAAGTTCAAGTCCCATTGAAAAGGGAAAAAGCTCCCGCTCTGTGCAGCAGGAGAAAGAACAACTCTCTACTATACCTTCAGGACCCTCTCTGGGAGATTTTGTTCTTTGGAGGGGTGAGCCAACAAGCCCATCTCCTTCTCCAGCTTGGACAATTGATTCTGGCAAGGTTCCCAAACCACTGTCATTAAGGGACATTCTAAAGGAGCAGGAGAAAAAGTCTTCTTCTGCAGTTCCCCCAAACCAATTTCCTAGCCCTCAGAAATCACAGCCTGCCCAAGCTGCTCAGAGTAGTGTTCCTTCACGGACAATTTCAGCTTCAGCTCCATCTAAAGCTGCATCTTCTAGCCACACAAACTCCCAAGCTTCTCATTCAAAATACAGAGGGGATGATGACATGTTCTGGGGTCCAATTGAGCAATCTAAGCTAGAAACTAAGCAGTCAAATTTCCCTCAGTTTGCAAGCCAGGGGAGTTGGGGTTCCAAAAACGTTCCCGTGAAAGGTAATTCACCTGGATCATTAAGCCGTCAAAAATCAGGGAGTAGCAAACCAACTGAGCGGTTGCTGTCATCATCACCCGTCTCTTCTCAATCATCgctgaaattaaaaaaagatgtCATGACTAGGAACTCTGAAGCCACGGACTTCAGAGTCTGGTGTGAGAATGAATGTGTGAGGCTTATTGGGACAAAAGATACAAGTTTCCTCGAGTTTTGCTTGAAGCAATCAAGATCCGAAGCAGAGATGTTTCTGATAGAAAACCTCGGATCATATGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGAGTTACTGCCATCTGAAGTTTTGGAAATAGCTTTTCAGACTCGGAATGATTGGAAAGTTGCTGGAGGTGTGATATCTGGAAACACGAGTTTACAGGATATCGGACAGACTGATGGATCCTCCTCAAAAGGTGGGAAGAAGGGTAAGAAAGGGAAAAAGGTTAGTGCTTCAGTTTTGGGATTCAATGTCGTAAGTAACCGGATTATGATGGGTGAGATCCAGACAGTAGAAGACTAA 5316 0.4313 MSHRSSATALHISTAPPFQISKDFQGSDNPIPLSPQWLLPKPGDGKPGAGIVENHVISTPSFGNRSETVKTSGNGEDVHDDHKRKDVFRPSVLDSESGRHDRWRDEERDTKFSVRKDRWRDGDKVSGDAQRRDRWVDNPSTRNFGETRRSTSDRWNDSGNREMNFDQRRENRRTSRWGHDEKEPEVFHEKQNESGKNGDLHLDKVMSHISNPGKDEKEGKIEPWRPSSFQRRAKTETSHQQNVTPSKQVPIFSSGRGRGEDTLPVANPGRGWFGSGGSPTSSSYMHSQYPQTGLDKVQSERGETHPFRYSRTNILDVYKVTDVHTAIKLVDDFAQVPPFTQDEPSEPLALCAPTSEELTVLKGIDKGEIISSSAPHVPKDGRNSTEFTHSRQMKHGNAPLQDRGEDGGSYKVADEVHSNRESAFEENNSVRPGTGWHATSLGEQASSLVHDSKDVPGDVRSRHSDMKSSYQPKDFRTQWENNMDYSSDAIDVAKWQSGENSIVKRQPTGFLDGEIETRKVPQTSPEELSLFYKDPRGQVQGPFKGIDIIGWFEAGYFGIDLLVRLESAAADSPWFQLGDVMPHLRAKARPPPGFPATKLDTTEAPVRQSSNTFGNIPTGPSEVETLRNNSMHGLGSATEAENRFLESLMSGSNSSPPLENLTLSEGIQGFIGNNSSNLGPSGVDGGNNPYLLAQRMALERQRSFPSPYPYWPGIDAGSLPPKSDFVPDASPHSKLMSSLSGNSRQLQYQNSELNSVIQGLSDRGSTGLNNGVTSWSNYPLQGGLNPLQNNIDLHRDQNFIPFGIQQQTYQAPNQFSFNNLIAQTVDNPSSILAAEQLFSSSLSQDPQMVNMLQQQYLLQLHSQATTPSQHILDKLLFLKQQEEQQLLMRQQQQLLSQVLQGHHSHQHFSDLSYGQMQAGGVRMGNLHVDPSQRQPSHEIFPMSSQTPVPSVHDELSTQSLNLSLQESQGTSFNKSIESSVQLPHQLFGNISHHKSWDTTIPEQINEQYQKETSPASAPVESFLLHEQNRTTEEPNIAQKPFSASDCNVEYVEQMSDNNGTADGTLVNAISESVEHSKPALCVEPVIAASSAESCEIELPPAGQLGMDMEIKPGSVEEQVGGRVISNVEPSVAGARDIEVREPKKATEKKPKKQKSSKSQSSGQAKGLLKNATLQQSNNSEPKKSNYSEINLKEVNRDEEDYETHLKQTSGEDSLSRTAITKAVVHQEVSDLPANIQESITETVVENDSKSLSSVAIQTTELPAGRAWKPAPGFKAKSLLEIQQEEQKKAQTEMPVIEVATTVNSLGVTTPWVGVVANPDSTKVSSQNHKEAGSTENLVKTKTSQNSKSKKSPLHDLLAEDAESTGPDSISFSQYISAAHSEPIDDGDFIEAKDTKRNRKKSTKSKGSGSKISKPVASSETPISSSPIEKGKSSRSVQQEKEQLSTIPSGPSLGDFVLWRGEPTSPSPSPAWTIDSGKVPKPLSLRDILKEQEKKSSSAVPPNQFPSPQKSQPAQAAQSSVPSRTISASAPSKAASSSHTNSQASHSKYRGDDDMFWGPIEQSKLETKQSNFPQFASQGSWGSKNVPVKGNSPGSLSRQKSGSSKPTERLLSSSPVSSQSSLKLKKDVMTRNSEATDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMFLIENLGSYDPDHEFIDKFLNYMELLPSEVLEIAFQTRNDWKVAGGVISGNTSLQDIGQTDGSSSKGGKKGKKGKKVSASVLGFNVVSNRIMMGEIQTVED 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 274 288 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 147 229 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 230 251 - -
Tsu07g00345 1771 PANTHER GYF DOMAIN-CONTAINING PROTEIN 5 1771 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1133 1189 - -
Tsu07g00345 1771 PANTHER GYF DOMAIN-CONTAINING PROTEIN 5 1771 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1562 1625 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1318 1625 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1156 1185 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1 288 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1 32 - -
Tsu07g00345 1771 ProSiteProfiles GYF domain profile. 527 578 IPR003169 GO:0005515
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1383 1397 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1134 1154 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1725 1744 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 72 139 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1495 1544 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 371 410 - -
Tsu07g00345 1771 SUPERFAMILY GYF domain 519 584 IPR035445 -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 419 438 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 57 71 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1194 1213 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 445 471 - -
Tsu07g00345 1771 CDD GYF 527 584 IPR003169 GO:0005515
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 927 951 - -
Tsu07g00345 1771 SMART gyf_5 528 583 IPR003169 GO:0005515
Tsu07g00345 1771 Gene3D - 515 601 IPR035445 -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1407 1449 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1194 1209 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 929 951 - -
Tsu07g00345 1771 Pfam GYF domain 531 568 IPR003169 GO:0005515
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 396 410 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 453 470 - -
Tsu07g00345 1771 MobiDBLite consensus disorder prediction 1318 1351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00345 Tsu-Chr7 2597416 2606005 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00345 07 2597416 2606005 Tsu07g00345 07 2597416 2606005 ECH
Tsu01g00316 01 2577731 2587607 Tsu07g00345 07 2597416 2606005 PCT