Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00337 ATGGCTTCAAGCACGAATTGGAcagcaaaacagaacaaaagaTTTGAAAATGCATTGGCAATGTTGGAGAAGGATACTCCTGATCGTTGGCAGAAGCTAGCTAGAGCTGTGGGAGGGAAAACTGTTGAAGAAGTGAAAAGACATTATGAGATGCTTGTTGAAGATGTAAAGCAGATTGAGGAAGGACATGTTCCCCTGCCTAATTACACAAATAATCTTGGTTACACTTACATAATGGATCAAGATAAAAGGATGAAGGCACTAAGTCTCCATTGA 276 0.3732 MASSTNWTAKQNKRFENALAMLEKDTPDRWQKLARAVGGKTVEEVKRHYEMLVEDVKQIEEGHVPLPNYTNNLGYTYIMDQDKRMKALSLH 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00337 91 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Tsu07g00337 91 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Tsu07g00337 91 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
Tsu07g00337 91 SMART sant 3 55 IPR001005 -
Tsu07g00337 91 Gene3D - 1 66 - -
Tsu07g00337 91 CDD SANT 6 53 IPR001005 -
Tsu07g00337 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Tsu07g00337 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00337 Tsu-Chr7 2552978 2553343 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g00337 Myb_DNA-binding 6.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00337 07 2552978 2553343 Tsu07g00337 07 2552978 2553343 ECH
Tsu01g00302 01 2469192 2470145 Tsu07g00337 07 2552978 2553343 PCT