Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00304 aTGAACACTACTTCACTTTCAAAGCCACTACTACTAGTAGTAGTAATTgcattctttcttttgtttctgTGTTGTGATTGCAATGTTACTTATGATAGAAAGTCTCTTCTCATCAATGGCCAAAGAAGAATCCTTATTTCTGGCTCAATTCACTATCCTAGAAGCACCCCTGAGATGTGGGAAGATCTAATTCGTAAGGCCAAACATGGTGGTCTTGATGTTATTGACACTTATGTCTTCTGGGATGTTCATGAACCATCTCCTCAAAATTACAATTTTGACGGAAGATATGATCTAGTAAGGTTTATTAAGACAGTGCAAAAGGTGGGGCTTTACGCCAATCTTCGCATTGGACCTTATGTTTGTGCTGAGTGGAACTTTGGGGGAATTCCTGTTTGGTTGAAGTATGTTCCTGGAATAAGCTTCAGAACAGATAATGGGCCTTTCAAGgcTGCAATGCAAGGTTTTACTCAGAAGATTGTTCAAATGATGAAGAATGAAAAGTTGTTTCAATCTCAGGGTGGTCCAATCATTTTTTCTCAGATTGAGAACGAATACGGACCAGAGAGTAGGGCAATGGGAGCTGCTGGTCATGCATACCTAAACTGGGCTGCTAATATGGCTGTTGGATTGAAAACAGGAGTCCCTTGGGTGATGTGCAAGGAAAATGATGCCCCTGATCCTGTGATTAATACATGTAATGGGTTTTACTGTCACGATTTCTCTCCAAATAAACCATATAAACCTAGCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGCCCAATTCATCAGCGACCAGTTCAAGATCTAGCATTTGCAGTTGCTCGTTTCATTCAGAAGGGTGGCTCATATGTGAATTACTACATGTACCATGGAGGAACTAACTTTGGACGATCAGCTGGGGGTCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATTCGGCAACCAAAATATAGTCATTTGAAGGAGCTTCATAAAGCTATCAAGCAATGTGAGCATGCTTTAGTTTCATCGGATCCTACGGTTACATCCTTAGGAACACTTCAACAGGCTCATGTATTCCATGCAGGAACTGCAGGATGTGCAGCTTTTCTAGCAAACTATCATGTACAGTCTGCTGCTACTGTGATTTTCAATAATAAGCACTATGACTTGCCTCCGTGGTCCATAAGCATCCTCCCCGATTGCAGAACTTCCATATTTAATACTGCAAAAGTGGGAGCTCAAACTTCAGTGGTAAAAATGCTTCCTGTCATTTCTAGGTTCTCGTGGGAGACCTATGATGAAGATCTATCTTCTCTGGATGAAAGCTCAAGGATTACAGCTGTTGGACTCTTAGAACACCTCAACGTTACCAGAGACACCAGTGACTATCTGTGGTACATAACCAGTGTTGACATAAGTTCATCAGAATCATCTATTCGAGGAGGACGCAAACCCAGCATTAACGTGCAGTCTGCAGGACATGCTGTCCATGTGTTTGTTAATGGGCAATTTTCAGGGTCGGCTTTTGGGACAAGGAAACAGCGAAGTTGCACGTTTAGTGGACCAGTTAATCTACATGCGGGAACAAATAAAATTGCTCTTCTTAGTGTGACTGTTGGATTGCCAAACGTTGGCCGACACTATGAAACATGGGAGACAGGGATCACTGGTCCAGTTTTGCTCCATGGTCTTGACAATGGACCAAAAGATTTGACGCATTATAAATGGTCTTATCAGGTTGGCCTAAAAGGAGAGGCTGTGAATTTGGCGTCACCAAATGGGATCTCAAATGTTGATTGGGTTCAAGATTCACTAGTTTCTCGAAGCCAGTCACAACTAAAATGGCACAAAGCATATTTTAACACACCTGCGGGAAACGAACCATTGGCTTTGGACCTGGGAAGTATGGGTAAGGGCCAAGTATGGATTAATGGGCAGAGCATAGGAAGATATTGGATGGCTTATGCAAAGGGTGACGCTGGCTGTAATTCCTGCAGCTATTCTGGGGTATTCAAGCCTGCAAAGTGCCAACTTGGTTGTGGACAACCCACTCAACGATGGTATCATGTTCCAAGGTCGTGGCTAAAGCCAACACAGAACTTGATAGTAGTGTTTGAAGAATTAGGTGGAAATCCTTGGAAAATATCTTTGGTGAAGAGAACAGTACATACTGCAGGAGTTCATGAGTAG 2214 0.4205 MNTTSLSKPLLLVVVIAFFLLFLCCDCNVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPQNYNFDGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIIFSQIENEYGPESRAMGAAGHAYLNWAANMAVGLKTGVPWVMCKENDAPDPVINTCNGFYCHDFSPNKPYKPSMWTESWSGWFTDFGGPIHQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHKAIKQCEHALVSSDPTVTSLGTLQQAHVFHAGTAGCAAFLANYHVQSAATVIFNNKHYDLPPWSISILPDCRTSIFNTAKVGAQTSVVKMLPVISRFSWETYDEDLSSLDESSRITAVGLLEHLNVTRDTSDYLWYITSVDISSSESSIRGGRKPSINVQSAGHAVHVFVNGQFSGSAFGTRKQRSCTFSGPVNLHAGTNKIALLSVTVGLPNVGRHYETWETGITGPVLLHGLDNGPKDLTHYKWSYQVGLKGEAVNLASPNGISNVDWVQDSLVSRSQSQLKWHKAYFNTPAGNEPLALDLGSMGKGQVWINGQSIGRYWMAYAKGDAGCNSCSYSGVFKPAKCQLGCGQPTQRWYHVPRSWLKPTQNLIVVFEELGGNPWKISLVKRTVHTAGVHE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00304 737 PANTHER BETA-GALACTOSIDASE 3 736 - -
Tsu07g00304 737 SUPERFAMILY Galactose-binding domain-like 583 731 IPR008979 -
Tsu07g00304 737 SUPERFAMILY Galactose-binding domain-like 403 573 IPR008979 -
Tsu07g00304 737 PANTHER BETA-GALACTOSIDASE RELATED 3 736 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 Gene3D Glycosidases 24 344 - -
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Tsu07g00304 737 Gene3D - 439 585 - -
Tsu07g00304 737 Gene3D - 603 734 - -
Tsu07g00304 737 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Tsu07g00304 737 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Tsu07g00304 737 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Tsu07g00304 737 Pfam Glycosyl hydrolases family 35 35 340 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00304 Tsu-Chr7 2341878 2346620 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00304 07 2341878 2346620 Tsu04g03470 04 43843037 43849073 ECH
Tsu07g00304 07 2341878 2346620 Tsu07g00304 07 2341878 2346620 ECH
Tsu01g00261 01 2154403 2158894 Tsu07g00304 07 2341878 2346620 PCT