Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00295 ATGATGAGACGTAGTGGAGGAGTGAATTGTCAGGATTGTGGGAACCAAGCAAAGAAAGACTGTACACATCTAAGATGTAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGTCAAACACATGTTAAGAGTACTTGGGTTCCAGCAGCTAAACGCCGTGAaagacaacaacaacatcatcatctcTCTATGTTGCAGCATCATCACCACCAACACTTTCATCGTCCTAAAAGACACTCACAAAATCAACAAGGTGCACTCTCTTTTCCCATCCCTACCACCACAGggtttgagttgGGACAATTCCCACCAGAGGTGAGTTCTCCAGGAGTAACGTTTCGGTGTGTGAGAGTGAGTTCATTGGACGGTCCAGATCATGATCAATGTGCTTATCAAACGGCTGTGAACATAGGAGGACATGTTTTCAAAGGAATTCTCTATGATCAAGGTCCTCCAAGTCTTTACACTAGTAGTACTACACCTATTCATGAGGGTTCTTCTGGTGGAGGTggtcatcatcatcaacctcaACAACTTGATTTCTTAACCGCTGCAACAACCGCTACAACCACCACCGGTATCTCATTCGACCCTTCGCTTTATTCTGCTCCGCTAAATGCTTTCATGGCAGCAGCTGGTACACAATTTTTCCACCCCCAACATCCTAATTGA 669 0.4126 MMRRSGGVNCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQHHHLSMLQHHHHQHFHRPKRHSQNQQGALSFPIPTTTGFELGQFPPEVSSPGVTFRCVRVSSLDGPDHDQCAYQTAVNIGGHVFKGILYDQGPPSLYTSSTTPIHEGSSGGGGHHHQPQQLDFLTAATTATTTTGISFDPSLYSAPLNAFMAAAGTQFFHPQHPN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00295 222 Pfam Domain of unknown function (DUF702) 7 150 - -
Tsu07g00295 222 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 4 218 IPR007818 GO:0003700|GO:0006355
Tsu07g00295 222 MobiDBLite consensus disorder prediction 53 78 - -
Tsu07g00295 222 MobiDBLite consensus disorder prediction 154 175 - -
Tsu07g00295 222 MobiDBLite consensus disorder prediction 53 85 - -
Tsu07g00295 222 PANTHER PROTEIN SHI RELATED SEQUENCE 7 4 218 - -
Tsu07g00295 222 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 9 51 IPR006510 -
Tsu07g00295 222 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 100 150 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00295 Tsu-Chr7 2265278 2266513 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Tsu07g00295 DUF702 4.6e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00295 07 2265278 2266513 Tsu02g02457 02 25066127 25067024 ECH
Tsu07g00295 07 2265278 2266513 Tsu07g00295 07 2265278 2266513 ECH
Tsu01g00255 01 2091164 2092648 Tsu07g00295 07 2265278 2266513 PCT