Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00283 ATGACTACTCTTTCTCTTttccctcttcttcttctccctctcatttttattataacaacCACCGTGACCTTTCCATCTCCAGCTCAAGCTGGCGGCGGACAATGGCAACTCTTACAAGAAAATATCGGCGTTGTAGGTATGCACATGCAATTACTCCACAACGATCGTGTTGTCATTTTCGACCGCACAGATTTTGGCTTATCAAACTTATCCTTATCCAATGGTAGATGTCGTAATAACCCACAAGAACAAGTAGTTAAAACCGATTGCACTGCTCACTCCCTTGAATATGATGTTGTTTCCAACACATTCCGGCCTCTCTTTATACAAACCAATGTTTGGTGTTCCTCTGGTTCTGTCTCTCCCAATGGTACTCTTATCCAAACAGGAGGTTTCAACGATGGAGACCGTACCGTTAGAACCTTCAATCCATGTCCAAACTGTGATTGGCAAGAATTTAATGCCGGCCTTGCAGCTCGAAGATGGTATGCCACCAATCACATGCTTCCAGATGGAaggcaaattattattggtggaAGAAGACAATTCAACTAtgaattttatccaaaaaaagaTGCCACGGCAAAAAACATATATAGTCTGCCTTTTCTTGTACAAACAAATGATGCTGGAGCTGAGAACAATctttacccttttgtttttctcaATGTAGATGGAAATCTTTTCATCTTTGCAAATAACCGtgctattttgtttgattacaacaacaacaatgttGTTAAAACATACCCTTCAATACCAGATGGAGAACCAAGGAATTATCCCAGTACGGGTTCCGCTGTTTTGCTTCCTTTAAGAAACTTACAAAAGCCTTCGGTTGAAGCCGAAGTAATGATTTGTGGCGGTGCTCCAAAAGGTTCGTTTCAGAAAACATTGCAGGGAAGTTTTGTCGGAGCATTGAATACATGTGCTCGGATGAAAATAACTGACCCAAATCCAAATTGGGTTATGGAAACTATGCCAGGTGGAAGAGTCATGAGTGACATGCTTTTACTTCCTAACGGCGACGTTTTGTTAATTAACGGAGCAACTCTGGGGTCCGCGGGCTGGGAATCAGGTCGAAACCCGATTTTAAATCCATTTCTTTATAAACCAAATGGTGTTAATGGTTCACGATTTCAATTACAAAACCCGTCTAGGATACCTCGAATGTACCATTCTACAGCAGTTTTGCTTCGTGACGGTAGGGTCCTTGTTGCCGGTAGCAATCCTCACGTTGATTATAAGTTTGGAAATGTTTTGTTTCCAACGGAATTGCGTTTAGAAGCTTTTTCCCCTTCCTATTTAGAAGCTGGATCCGATGATTTGCGCCCTACATTGGTGTTTCCTGCACCCCAATCACAAACAAAATTGAAGTATGGTCAAAAATTGAAAGTTCGGTTTCAGGTCACGGCAAAATTGGTGAAAAATTTAGTTTCGGTGACAATGTTAGCTCCGTCTTTCAATACACATTCTTTCTCCATGAATCAGAGATTGTTAGTGCTTGATGAAGTGAAACCAACAAACAAAGTGagtagtaaaaaaattgttgttgaaAAATCAGCATTGGTGTACCAAGTTGAAGTGACAATACCTAGTTCACCCATTCATGCACCTCCTGgttactatttattatttgtaGTCCATCAAGAAATTCCAAGTCAGGGTATTTGGGTCCAATTACTATAA 1689 0.3736 MTTLSLFPLLLLPLIFIITTTVTFPSPAQAGGGQWQLLQENIGVVGMHMQLLHNDRVVIFDRTDFGLSNLSLSNGRCRNNPQEQVVKTDCTAHSLEYDVVSNTFRPLFIQTNVWCSSGSVSPNGTLIQTGGFNDGDRTVRTFNPCPNCDWQEFNAGLAARRWYATNHMLPDGRQIIIGGRRQFNYEFYPKKDATAKNIYSLPFLVQTNDAGAENNLYPFVFLNVDGNLFIFANNRAILFDYNNNNVVKTYPSIPDGEPRNYPSTGSAVLLPLRNLQKPSVEAEVMICGGAPKGSFQKTLQGSFVGALNTCARMKITDPNPNWVMETMPGGRVMSDMLLLPNGDVLLINGATLGSAGWESGRNPILNPFLYKPNGVNGSRFQLQNPSRIPRMYHSTAVLLRDGRVLVAGSNPHVDYKFGNVLFPTELRLEAFSPSYLEAGSDDLRPTLVFPAPQSQTKLKYGQKLKVRFQVTAKLVKNLVSVTMLAPSFNTHSFSMNQRLLVLDEVKPTNKVSSKKIVVEKSALVYQVEVTIPSSPIHAPPGYYLLFVVHQEIPSQGIWVQLL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00283 562 PANTHER SECRETED PROTEIN-RELATED 28 561 - -
Tsu07g00283 562 CDD E_set_GO_C 439 561 IPR015202 -
Tsu07g00283 562 Gene3D Immunoglobulins 444 562 IPR013783 -
Tsu07g00283 562 Gene3D - 29 443 IPR037293 -
Tsu07g00283 562 SUPERFAMILY Galactose oxidase, central domain 96 437 IPR011043 -
Tsu07g00283 562 Pfam Galactose oxidase-like, Early set domain 455 560 IPR015202 -
Tsu07g00283 562 SUPERFAMILY E set domains 441 561 IPR014756 -
Tsu07g00283 562 Pfam Glyoxal oxidase N-terminus 47 289 IPR009880 -
Tsu07g00283 562 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 28 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00283 Tsu-Chr7 2151242 2153596 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00283 07 2151242 2153596 Tsu07g00283 07 2151242 2153596 ECH
Tsu01g00244 01 1983119 1986257 Tsu07g00283 07 2151242 2153596 PCT