Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00275 ATGGACCGGCGCTGGCCGTGGAAGAAAAAATCGTCTGATAAGGCTGTGATTGAGAAAACAGCTGCTTCACTAGACTCTGCAGATGCTTCCAATCAGGATAACGGCAAGAAACAGAATTATGTCCAAATCTCTGTGGAATCCTATTCACATCTGACTGGTTTGGAGGATCAAGTGAAGATATATGAGGAAAAATTGAAGACATATGACGAACAATTTCAAACATATGAGGAAAAAGTGAAGACATATGACGAACAAGTTCAGACTTATGAGGAAAAAGTTCAGACACTTGAAGATgagatcaaagaaatgaatgaaaaaCTTTCAGCAGCAAACTCTGAGATTAATACTAAGGAAACCGTGGTAAAGCAACATGCTAAAGTAGCTGAAGAAGCCGTCTCAGGATGGGAAAAGGCTGAAGCTGAGGCTTTGGCATTGAAAGAGCATCTAGAATCTGTCACTCTTTCTAAACTCACTGCTGAGGACCGTGCATCACATTTAGATGGTGCTCTTAAAGAGTGCATGCGACAGATACGGAACCTTAAGGAAGAACATGAACAGAAAATACAAGAAGTTGCTCTGTCGAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTTGAGGCTAAGATAGCTAGCTTTGAACAGGAACTACTGAGGTCTGCTGCTGAAAACAGGGCGCTGTCAAGGTCCTTGCAGGAACGCTCTAACATGCTAATCCAATTAAGCGAACAAAAAGCTAGTGCCGAGGCTGAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAAAGAGAAATTAGTTCACTTAAATATGAACTTCATGTTGCTTCTAAAGAGCTTGAAATTCgcaatgaagaaaaaaacatgaGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTAAAAAAGATTACCAAGTTGGAAGCTGAATGCCAAAGACTACGCGGACTAGTTCGGAAAAAGTTACCTGGTCCTGCTGCACTCGCACAAATGAAGCTAGAAGTTGAAAATCTCGGCCGAGATTATGGAGAAAGTCGATTAAGGAAATCACCTGTAAAGGCTGCTGCCCCTAATTTGTCCCCGTTACCTGAGTTCTCCCTAGAGAATGTGCAGAATTTCCAGAAAGAGAATGAGTTTCTCACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCGTTGGCTAAACGCAACAGCGAATTGCAGGCCTCAAGGAGCACGTGTGCTAAAACACTGagcaaacttcaaagtttgGAATCACAACTTCAGACAAGCAACCAGCCGAACGGATCTCCAAAATCCACAATGCATGTAACCCACGAAAGCATTTATAGTCAAAATGCAAGCATTGCACCTAGCTTAGTTTCCATGTCTGAAGATGGAAATGATGATGCAGCAAGTTGTGCCGAGTCTTGGTCTACAACAATGGCATCTGGGCTATCCCAAGTTTCTAAAAAGTATACAGAGGAATCAAGCAAAGCCGAAGCCATTCAAAAGTTGGAGCTAATGGACGACTTTCTGGAGGTGGAGAAGTTAGCTCGTTTGTCAATTGATTCCAACATCGATGCCACAGTTTCCTTATCTTCAGACAATAACACAACTGATGGTGTGACTAATGATGTATCACAAGTCAGTACTGGCACAGTTGGTTTGTCTGGAACAAATGGCGATTCAAATCCTTTGCCAAATCAAGTGTCTTCCAGTGCTTTGATAGTACCTGATCCCCAGTCTGATGTTGGTGGCTTATTAACAGAGCTTAGATCAAGAATATTACTTGTTTTTGAGTCCATAGGTAACAATGCTGACATAGGGAAGATCATTGAGGATATTAAACATGTGCTAGAAGATTCACATGACACTGCCAATCACCCCTCTGAAGGTTTCATTTCCCAGGATGGACAAACTTCTGATGCCACATGTGATAGGCAGAAAAATCCTGAAGATGCTGGCTTAGTCCTTGATAAGGAAACCATTTCATCCTTGCAACCCAAAGAGTATGTGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTCATATTCATGACTTCGTATTGTTACTAGGCAAAGAGGCAATTTCATTTCATGACGTATCTTCTAATGGAAACGAAATGAGCCAAAAGATTGAGGAGTTTTCTGCCACCTTCAGCAAAGTTTTATGCAGCAATACCAGTCTGCTACAGTTTGTTCTTGACTTGTCTTACGTTTTGGCTAAAGCGAGTGAACTCAGATTTGGTGTCCTTGGATACAAGGGTACAGAAGCTGAAACTAACAGTCTCGATTGCATAGATAAGATTGCTTTGCctgaaaataagttaattcaagaCAGTTCATCAGGAGAAAGATATCTAAATGGTTCTTCCCGTGTTCTTAATCCATGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGGTTTCGGGCTATAGAGCGATTGTGGCATCACAAAAACCGTCATTTGAGGAATTTGAAGAACTGAAACTAGAGAAAGAGAAAGTAGCAACAGATCTGTCAATATGTACCGAGAATCTTGAATTGACCAAGTCTCAATTGGTAGAAACTGAGCAACTTCTAGCAGAAGTTAAATCACAGTTGGCTTTTGCTGAAAGATCAAATAGCTTGGCTGAGACGCAGCTAAAGTGTATGGCGGAGTCTTACAAGTCACTTGAAACACGTGCCCAGGAGTTCGAAACTGAGCTGAACCGTTTGCAAAGTACGATAGAAACTCTGGAGAATGAACTTCACGATGAAAAGAAGGCTCATGAAGCTGCTTTAGTGAAGAGCAAGGAGCTAGAAGAGCAGTTACTAAGGATTGAGAGCTCAACCGCCGAAAATGAAGTCAAATCTACACAGGAGAAAGATTTGGCAGCAGCCGCTGAAAAGCTAGCCGAGTGTCAAGAAACCATATTCCTTTTGGGAAAGCAGTTAAATGCTATACATCCTCAAAGTCAACCAATTGAGTCTCCTTACAACAACACAAGTCCAAATACTACTAGTAGCTCAAATCTTCAAGAAGTAGGTCAATTGGAGATGGACACTGCCACTTCTCCTTTCGTGCAAAGACTGAGTTCGGATTCCCCCTTGCATTTTTCCAATGGTTTATTTGTCCCATCAGATAATGATTCTAACGTTCTGGCCAGATCTCCGGCACCGcttccaaaatcaaaaccaaaacacagACCTACCAAGTCAGCCTCTTCTTCAACTTCTTCCGCCACTACACCGGAGAAACAACGGGGATTTAGTAGATTCTTTTCATCAAAAGGGAAGCCTGGTTATTAA 3303 0.4066 MDRRWPWKKKSSDKAVIEKTAASLDSADASNQDNGKKQNYVQISVESYSHLTGLEDQVKIYEEKLKTYDEQFQTYEEKVKTYDEQVQTYEEKVQTLEDEIKEMNEKLSAANSEINTKETVVKQHAKVAEEAVSGWEKAEAEALALKEHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIASFEQELLRSAAENRALSRSLQERSNMLIQLSEQKASAEAEIEHLKSNIESCEREISSLKYELHVASKELEIRNEEKNMSMRSAEAANKQHMEGVKKITKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKAAAPNLSPLPEFSLENVQNFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSTCAKTLSKLQSLESQLQTSNQPNGSPKSTMHVTHESIYSQNASIAPSLVSMSEDGNDDAASCAESWSTTMASGLSQVSKKYTEESSKAEAIQKLELMDDFLEVEKLARLSIDSNIDATVSLSSDNNTTDGVTNDVSQVSTGTVGLSGTNGDSNPLPNQVSSSALIVPDPQSDVGGLLTELRSRILLVFESIGNNADIGKIIEDIKHVLEDSHDTANHPSEGFISQDGQTSDATCDRQKNPEDAGLVLDKETISSLQPKEYVQITSDLEAAISHIHDFVLLLGKEAISFHDVSSNGNEMSQKIEEFSATFSKVLCSNTSLLQFVLDLSYVLAKASELRFGVLGYKGTEAETNSLDCIDKIALPENKLIQDSSSGERYLNGSSRVLNPCSDPEVPDDGNLVSGYRAIVASQKPSFEEFEELKLEKEKVATDLSICTENLELTKSQLVETEQLLAEVKSQLAFAERSNSLAETQLKCMAESYKSLETRAQEFETELNRLQSTIETLENELHDEKKAHEAALVKSKELEEQLLRIESSTAENEVKSTQEKDLAAAAEKLAECQETIFLLGKQLNAIHPQSQPIESPYNNTSPNTTSSSNLQEVGQLEMDTATSPFVQRLSSDSPLHFSNGLFVPSDNDSNVLARSPAPLPKSKPKHRPTKSASSSTSSATTPEKQRGFSRFFSSKGKPGY 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00275 1100 Coils Coil 851 941 - -
Tsu07g00275 1100 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 87 1099 - -
Tsu07g00275 1100 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 90 - -
Tsu07g00275 1100 Coils Coil 163 223 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 536 568 - -
Tsu07g00275 1100 Coils Coil 374 401 - -
Tsu07g00275 1100 Coils Coil 955 975 - -
Tsu07g00275 1100 Pfam Filament-like plant protein, long coiled-coil 117 991 IPR008587 -
Tsu07g00275 1100 Coils Coil 51 120 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 626 653 - -
Tsu07g00275 1100 Gene3D - 38 135 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 631 648 - -
Tsu07g00275 1100 SUPERFAMILY Tropomyosin 829 994 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 1040 1100 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 1069 1088 - -
Tsu07g00275 1100 Coils Coil 231 297 - -
Tsu07g00275 1100 SUPERFAMILY Tropomyosin 49 285 - -
Tsu07g00275 1100 PANTHER FILAMENT-PLANT-LIKE PROTEIN 87 1099 - -
Tsu07g00275 1100 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 90 - -
Tsu07g00275 1100 MobiDBLite consensus disorder prediction 989 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00275 Tsu-Chr7 2103278 2108417 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00275 07 2103278 2108417 Tsu07g00275 07 2103278 2108417 ECH
Tsu01g00213 01 1642603 1647889 Tsu07g00275 07 2103278 2108417 PCT