Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00245 ATGTGTAGCATAATGTTCTGTTTCATATTATTGGGAGTTGCTTCTATTGTGGCAGCAGCATTGGAACTTCCACCAAATGTTACATTTCCAGCAGTTTTTGTGTTTGGAGATTCTATCATGGATACAggtaacaacaacaataacatgaAAACACTTGCTAGGTGCAATTTTCCACCATATGGAAAAGATTTCAAAGGAGGTATCCCAACTGGTCGGTTTGGCAATGGAAAAGTTCCATCAGACCTTATAGTTGAAATATTGGGCATTAAAGAACTTCTACCTGCATATTTGGATCCAAATATCCAGCCTAGCGATCTCATCACGGGTGTTTGCTTTGCATCCGGCGGTTCGGGGTATGATCCTCTCACATCCAAAATTGCGGCAGCTATATCATTGTCCGGTCAAATAAATTTGTTCAAAGAATACATAGGAAAGCTAAAAGAACTTGTTGGAGAGGATAGAACAAAATTCATCCTAGCCAATAGTATTTTCCTTGTGGTTCAAGGAAGCAACGACATttcaaatacatattttttgcTTCATGCTAGACAACTTCAATATGATGTTCATGCTTACACTGACCTCATGCTCAACTCTGCTTCCAATTTCTTAAAGGAAATATATGAACTGGGTGCACGGAGGATAGGAGTATTTAGTGCTCCACCAATTGGGTGTGTGCCATTTCAGAAAACAATTCTTGGAGGAGTGGAAAGAAAATGTGCAGAAAAATACAACGATGCATCCAAGTTATTTAACACTAAATTGTCAATGGAGCTGGCTTCCCTTAACCACAACTTGCCCAATTCAAGGATGGTTTACCTTGATGTTTATAATCCTCTTCTTGACATCATTGTAAACTATCAAAATTATGGTTATAAAGTTGGGGACAAAGGATGTTGTGGTACAGGTGAAATTGAGGCAGCAGTGTTATGCAACCAATTTGCTCCTCCGTGCGAAGATGTTACGGACTATGTTTTCTGGGACAGTTTTCATCCTTCGCAAAGTGTTTACAACAAGCTCGTCGATCCTCTTCTTCAAAAATATATGCCCCAATTCTTCtag 1062 0.3795 MCSIMFCFILLGVASIVAAALELPPNVTFPAVFVFGDSIMDTGNNNNNMKTLARCNFPPYGKDFKGGIPTGRFGNGKVPSDLIVEILGIKELLPAYLDPNIQPSDLITGVCFASGGSGYDPLTSKIAAAISLSGQINLFKEYIGKLKELVGEDRTKFILANSIFLVVQGSNDISNTYFLLHARQLQYDVHAYTDLMLNSASNFLKEIYELGARRIGVFSAPPIGCVPFQKTILGGVERKCAEKYNDASKLFNTKLSMELASLNHNLPNSRMVYLDVYNPLLDIIVNYQNYGYKVGDKGCCGTGEIEAAVLCNQFAPPCEDVTDYVFWDSFHPSQSVYNKLVDPLLQKYMPQFF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00245 353 SUPERFAMILY SGNH hydrolase 31 348 - -
Tsu07g00245 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 351 - -
Tsu07g00245 353 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 IPR008265 GO:0006629|GO:0016298
Tsu07g00245 353 Pfam GDSL-like Lipase/Acylhydrolase 32 342 IPR001087 GO:0016788
Tsu07g00245 353 Gene3D SGNH hydrolase 23 349 IPR036514 -
Tsu07g00245 353 CDD SGNH_plant_lipase_like 30 348 IPR035669 -
Tsu07g00245 353 PANTHER GDSL ESTERASE/LIPASE EXL3 13 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00245 Tsu-Chr7 1890826 1894517 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00245 07 1890826 1894517 Tsu07g00245 07 1890826 1894517 ECH
Tsu01g00179 01 1379282 1383285 Tsu07g00245 07 1890826 1894517 PCT
Tsu07g00245 07 1890826 1894517 Tsu01g00180 01 1409216 1415000 PCT