Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00148 ATGGCTTTTTTCTCCTCCAAAACACTTGTCCTGACCTGCTCCTTATGCCTATTTCTATCTCTAGCTTTCGGACGCGATTTCTCCATCGTGGGCTATTCATCAGAGGATTTAAAGTCCATGGATAAGCTCATTGAACTCTTCGAATCATGGATGTCGAGACATGGTAAGATTTACGAGACCATTGAGGAAAAGTTACTTAGGTTCGAGGTGTTTAAGGATAACCTAAAGCACATTGATGATAGAAACAAGATTGTTAGCAACTATTGGCTTGGTCTAAATGAGTTTGCTGATTTGAGCCACCAAGAGTTCAAGAACAAGTATCTTGGACTAAAGGTTGACTTATCTCAAAGGAGAGAATCCTCAAATGAAGAGGAATTCACTTATAGAGATGTTGATTTGCCTAAGTCAGTTGACTGGAGAAAGAAAGGTGCCGTCACCCCTGTCAAGAATCAAGGTCAATGTGGTAGCTGCTGGGCATTTTCAACGGTTGCGGCGGTTGAAGGAATAAACCAGATTGTGACAGGAAATTTGACATCTTTGTCCGAGCAAGAGTTAATTGATTGTGACACAACTTACAACAATGGTTGCAATGGGGGTCTAATGGACTATGCATTCTCTTTCATTGTACAAAATGGTGGACTCCATAAAGAGGAAGATTATCCTTACATTATGGAGGAAAGCACTTGCGAAATGAAAAAGGAAGAAACCCAAGTTGTCACTATTAATGGGTACCATGATGTGCCACAAAATAATGAACAAAGTTTATTGAAGGCACTTGCCAACCAACCCCTTAGTGTGGCCATTGAAGCTTCAAGCAGAGATTTCCAATTTTATAGTGGAGGTGTGTTTGATGGGCATTGTGGAAGTGATCTAGATCATGGTGTGTCAGCCGTTGGATATGGTACATCAAAGAATTTGGATTACATCATAGTGAAGAATTCATGGGGGGCAAAATGGGGAGAGAAAGGTTTTATAAGGATGAAGAGAAACATTGGAAAGCCTGAAGGGATTTGTGGACTATACAAGATGGCTTCTTATCCTACTAAGAAAAAATAA 1056 0.4025 MAFFSSKTLVLTCSLCLFLSLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRESSNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVQNGGLHKEEDYPYIMEESTCEMKKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEKGFIRMKRNIGKPEGICGLYKMASYPTKKK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00148 351 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 308 327 IPR025661 -
Tsu07g00148 351 PANTHER - 24 349 - -
Tsu07g00148 351 SMART pept_c1 133 348 IPR000668 GO:0006508|GO:0008234
Tsu07g00148 351 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 151 162 IPR000169 -
Tsu07g00148 351 SUPERFAMILY Cysteine proteinases 42 348 IPR038765 -
Tsu07g00148 351 Gene3D Cysteine proteinases 26 350 - -
Tsu07g00148 351 CDD Peptidase_C1A 134 347 IPR039417 -
Tsu07g00148 351 SMART Inhibitor_I29_2 47 103 IPR013201 -
Tsu07g00148 351 Pfam Papain family cysteine protease 133 347 IPR000668 GO:0006508|GO:0008234
Tsu07g00148 351 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
Tsu07g00148 351 PRINTS Papain cysteine protease (C1) family signature 293 303 IPR000668 GO:0006508|GO:0008234
Tsu07g00148 351 PRINTS Papain cysteine protease (C1) family signature 308 314 IPR000668 GO:0006508|GO:0008234
Tsu07g00148 351 PRINTS Papain cysteine protease (C1) family signature 151 166 IPR000668 GO:0006508|GO:0008234
Tsu07g00148 351 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00148 Tsu-Chr7 1125910 1127561 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00148 07 1125910 1127561 Tsu07g00148 07 1125910 1127561 ECH
Tsu01g00256 01 2103858 2106062 Tsu07g00148 07 1125910 1127561 PCT