Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00098 ATGAAGATCCAATGTGATGTTTGTGAGAAAGCTGAAGCTTCCATATTCTGTCCTTCAGATGAAGCTGCTCTTTGTAATGGATGTGATCATACTATTCACCATGCCAACAAACTTGCAACCAAACATGCTCGATTCTCTCTTGTCCACCTCAACTCCAAAGACTACCCTCTTTGTGATATCTGCCAAgAGAGGCGTGGATATCTATTTTGCCAAGAAGACAGAGCGATTCTATGCAGAGAATGTGATCTACCAATCCATAGAGCAAATGAACATACACAGAAACATAACAGGTTTCTTCTCTCTGGTGTAAAGCTTTCAAACAATTCTTTGGACTTAGATTCATCATCTACCAGTATTGGTTCTGAATCCAGAAACTACTCTAGTAGATCAAAAGCAAACATGATACCAAGATCAGTTTCCAATGAAAATGTCAGTTCTTCATGCAAGGTTGAAGATAACATGGCTAGTGACACTGGTTCTGTTTCAACAAGCAGCATTTCTGAATATTTGATTGAAACAATACCGGGTTACTGCTTCGAAGATTTTCTTAATGCTTCATTCCCTCCTAATGGTTTCTGTAAGAATCATTATTCAGCATTTCAGTACCAAGATCTTAATGCTAGCAAGTTTTTGTTTCCTCAACCTCAAGTAACATGTGTACCTCTAGCACAGTTTCAATCAGCTCAACTAATTACTCCTACTCCTAATATTGGTTCAGTGATTGGAGTTAAAGAAATTCCAAAAGTGAACACTTCCAAAGGGAACTCAAAATGGAAGAAAGATTATGGATGTACAGTTCCAGGAAATGGTGctacattcataaaaaaatctaaatattcTAGATAA 846 0.3652 MKIQCDVCEKAEASIFCPSDEAALCNGCDHTIHHANKLATKHARFSLVHLNSKDYPLCDICQERRGYLFCQEDRAILCRECDLPIHRANEHTQKHNRFLLSGVKLSNNSLDLDSSSTSIGSESRNYSSRSKANMIPRSVSNENVSSSCKVEDNMASDTGSVSTSSISEYLIETIPGYCFEDFLNASFPPNGFCKNHYSAFQYQDLNASKFLFPQPQVTCVPLAQFQSAQLITPTPNIGSVIGVKEIPKVNTSKGNSKWKKDYGCTVPGNGATFIKKSKYSR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00098 281 SMART bboxneu5 53 100 IPR000315 GO:0008270
Tsu07g00098 281 SMART bboxneu5 4 47 IPR000315 GO:0008270
Tsu07g00098 281 Gene3D Classic Zinc Finger 1 99 - -
Tsu07g00098 281 CDD Bbox1_BBX-like 57 100 - -
Tsu07g00098 281 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Tsu07g00098 281 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 202 - -
Tsu07g00098 281 MobiDBLite consensus disorder prediction 112 131 - -
Tsu07g00098 281 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Tsu07g00098 281 CDD Bbox1_BBX-like 5 47 - -
Tsu07g00098 281 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270
Tsu07g00098 281 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00098 Tsu-Chr7 662987 664656 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g00098 zf-B_box 6.3e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00254 01 2066025 2067985 Tsu07g00098 07 662987 664656 PCT