Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03731 atggaaGAAATCACAGGAGCAGCAGTACCAAAATCTCTGATGGAGAATCTGTTAGGTCTTCTGAGGGTTCGTATCAAGCGTGGTGTCAACCTTGCTGTTCGTGATGTTCGTAGCAGCGATCCTTATCTTGTCCTCAAGATGTACAATCAgAAACTTAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGATCTTACTCTTTCTGTTATAGATCCTAATCACATAGTTTCATTGACTGTATATGATCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAGATCTCGACCTTTATAGAAACCCTGAGGATGAATGTTACCGGCCTAGCAAATGGCACCGTAATCAAACGTATACATCCAAGCAATCACAACTGCCTTGCTGACGAGAGCTGTATCTATTATTCCAACGGCAAAATTATCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATCAGTCTGCACTGGATTGATCTTCCTGGTTCTAGGggtttatga 537 0.3948 MEEITGAAVPKSLMENLLGLLRVRIKRGVNLAVRDVRSSDPYLVLKMYNQKLKTRVIKKDVNPEWNEDLTLSVIDPNHIVSLTVYDHDTFSKDDKMGDAEFEISTFIETLRMNVTGLANGTVIKRIHPSNHNCLADESCIYYSNGKIIQDMILRLQNVECGEVEISLHWIDLPGSRGL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03731 178 Gene3D C2 domain 15 176 IPR035892 -
Tsu06g03731 178 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Tsu06g03731 178 SMART C2_3c 20 115 IPR000008 -
Tsu06g03731 178 CDD C2_ArfGAP 18 161 - -
Tsu06g03731 178 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 9 176 IPR044562 -
Tsu06g03731 178 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 9 176 - -
Tsu06g03731 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 104 IPR035892 -
Tsu06g03731 178 Pfam C2 domain 19 108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03731 Tsu-Chr6 49381196 49384227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03731 51 178 C2H2 Transcription Factor Family AT1G70790 58.462 5.28e-50 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01100 01 10116432 10119229 Tsu06g03731 06 49381196 49384227 ECH
Tsu06g03731 06 49381196 49384227 Tsu06g03731 06 49381196 49384227 ECH
Tsu02g00021 02 138106 139051 Tsu06g03731 06 49381196 49384227 PCT