Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01444 atgTCTCTGTTTCAAACCTTATTGTTGAACCAAAGTGACCCCATTGATCATTTCCAAGCTTTTCTCAACAGAAATTTAAAATCCTTGGATTATGAATCGAACATTCAAATGGATTGGAAAGAGACCCGTGATTCCCATATCTTTGAATTCGATCTTCCGGGGTTCACCAAAGAGGATGTGAAGATTGAGTTACATGAAAATAGAGTACTCTGTATCAAAGCAGAGAAGAAaacagaacaagaagaagaaaatgaagagatGAGTCTCAAGTGGCATTGCAGGGAGAGAAGGAACAATGGATTGTTGTTGAGGGAATTTAGATTACCTGAAAATTCAAAAGTTGATGATGTAAAGGCTTCAATGAATGATGGAGTGTTGACTATAGTAGTGGCTAAGGATgcaacaaaaaagaagaataatcATCAACACAAGAAGAAGGTTAAGATTTATGAAGAGGGTAGTGATGATGATGGTGTTTCTCACAAAGGAATTGGGCGTTTTGTTTGTTGCAAAGCATAG 519 0.3372 MSLFQTLLLNQSDPIDHFQAFLNRNLKSLDYESNIQMDWKETRDSHIFEFDLPGFTKEDVKIELHENRVLCIKAEKKTEQEEENEEMSLKWHCRERRNNGLLLREFRLPENSKVDDVKASMNDGVLTIVVAKDATKKKNNHQHKKKVKIYEEGSDDDGVSHKGIGRFVCCKA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01444 172 PANTHER 17.8 KDA HEAT SHOCK PROTEIN 23 148 - -
Tsu06g01444 172 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 28 152 IPR002068 -
Tsu06g01444 172 Gene3D - 2 149 IPR008978 -
Tsu06g01444 172 Pfam Hsp20/alpha crystallin family 38 149 IPR002068 -
Tsu06g01444 172 Coils Coil 62 82 - -
Tsu06g01444 172 SUPERFAMILY HSP20-like chaperones 10 139 IPR008978 -
Tsu06g01444 172 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 23 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01444 Tsu-Chr6 14389860 14390378 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01444 06 14389860 14390378 Tsu06g01444 06 14389860 14390378 ECH