Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03563 ATGATGATGTTTGATGACATGGGATTTTGTGGTGATTTGGACATGTTTTGTGGTACACTTGGGGAGGGGGATATTTCTGTGAGGCAAGCCGAGCCAGATTCGGTAGTCGAGGATGATTATAGTGATGAAGAAATGGATGTGGATGAGCTTGAACGAAGGATGTGGAGAGACAAAATGCGTCTCAAGCGATTGAAAGAGCAAACCAAGGCTAAAGAAGGAATTGATGCCGCAAAGGCAAGGCAGTCTCAGGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAGGGATTTGTTTACGGGATAATTCCCGAGAAGGGAAAACCGGTGACTGGAGCATCTGACAATCTTCgtgaatggtggaaggataaGGTCCGGTTTGATAGGAATGGTCCGGCTGCCATATCCAAGTATCAAGCAGATAACGCAATTCCAGGGAAGAATGATGGATGCAATTCCATCGGTCCAACTCCTCACACCTTGCAAGAATTACAGGACACAACCTTAGGTTCTCTCTTATCTGCACTTATGCAGCACTGTGATCCTCCTCAGAGGCGTTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCAACTGGAAACGAAGAGTGGTGGCCACAGATCGGTTTGCCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGATCTGAAAAAAGCATGGAAAGTCGGTGTTCTAACTGCGGTTATCAAGCATATGTCTCCTGATATAGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAGGAAAGTGCAACCTGGCTTGCTATCATCAACCAAGAGGAGGCCTTGGCTCGAGAGCTTTATCCGGATTATTGCCCCCCATTGTCCTCTAGCGGAGGTAGTGGTTCTATGGTCATCAACGATTGCAGCGAGTATGATGTTGATGGGGCTGAGGACGAGTCAAACTTTGATGTGGATGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGACAGGATGAGGGCAAGGTTTCCAGTTCAGCAACCTTCTCCTCCAATCAAGGGAGAGGTTGAGGTTATCACAAACTTGGATTTCATCCGGAAGAGGAAGATCTCTAGCGAATTTAACATGATGATGGATCAGAAAATCTACACTTGCGAACATCCTCAATGCCCTTATAGTGAAGTTCGCCTTGCCTTTCAAGACAGGTCTTCTAGGGACAATCATCAACTGAACTGTCCATATAGAAACAGTTCCGCTGGTTATGGCGCCCCTAACTTTCACGTTACCGAGGTTAAGCCCGTTATTTTCCCACAAAGCTTTGTTCAACCCAATCCTACAGTTCAGTCTGCTAGTTTGGTTCCACCTTCATTCGATTTAACCGGACTTGGAGTTTCGGAGGACGGCCAGAAAATGATTAGCGACCTAATGTCAGTCTATGATACCGATATTATAGCAAACAAGAATACAAGTCCCACCAATTGTATAACTGTTGAACACCAAAACCTTTCTCAACCCATCATTCAGCCACAACAACAGGAGAATTTCTTCTCGAGTCAAGGAATGAGTCAAGGAATGCCAATGGAAGCAAACTTTTTTACTCGTGAGGAAAGTCAATTTGACCGGTTTAGGGCCGTAAACACTCCATTCGAAaccaaccacaacaacaacaacaataatatcaATCTCATGTTTGGTTCTTCATGTGATTTGACATCCTTTGATTTTAAGGATGATCTACAACTACAAGGAGGAGGAGTAGGAATTGATACACTTTACAAACAACCAGATGTTTCATTATGGTACAACATTCAATGA 1869 0.4361 MMMFDDMGFCGDLDMFCGTLGEGDISVRQAEPDSVVEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSSGGSGSMVINDCSEYDVDGAEDESNFDVDDRKPENLHPSNLGMDRMRARFPVQQPSPPIKGEVEVITNLDFIRKRKISSEFNMMMDQKIYTCEHPQCPYSEVRLAFQDRSSRDNHQLNCPYRNSSAGYGAPNFHVTEVKPVIFPQSFVQPNPTVQSASLVPPSFDLTGLGVSEDGQKMISDLMSVYDTDIIANKNTSPTNCITVEHQNLSQPIIQPQQQENFFSSQGMSQGMPMEANFFTREESQFDRFRAVNTPFETNHNNNNNNINLMFGSSCDLTSFDFKDDLQLQGGGVGIDTLYKQPDVSLWYNIQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03563 622 Coils Coil 47 67 - -
Tsu05g03563 622 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Tsu05g03563 622 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
Tsu05g03563 622 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Tsu05g03563 622 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Tsu05g03563 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 619 - -
Tsu05g03563 622 MobiDBLite consensus disorder prediction 70 90 - -
Tsu05g03563 622 MobiDBLite consensus disorder prediction 332 353 - -
Tsu05g03563 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 619 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03563 Tsu-Chr5 47158931 47162365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03563 2 619 EIL Transcription Factor Family AT3G20770 60.305 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Tsu05g03563 EIN3 3.8e-131 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02180 03 23390515 23393859 Tsu05g03563 05 47158931 47162365 PCT